Strain Fitness in Escherichia coli ECRC100 around OKFHMN_12905

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,476,896	+	uvrA	OKFHMN_12895	0.81	+0.4
2,476,896	+	uvrA	OKFHMN_12895	0.81	+1.0
2,476,929	+	uvrA	OKFHMN_12895	0.82	+0.6
2,476,930	-	uvrA	OKFHMN_12895	0.82	+1.1
2,476,952	+	uvrA	OKFHMN_12895	0.83	+0.6
2,476,953	-	uvrA	OKFHMN_12895	0.83	+1.2
2,476,953	-	uvrA	OKFHMN_12895	0.83	+0.4
2,477,042	+	uvrA	OKFHMN_12895	0.86	-1.6
2,477,076	+	uvrA	OKFHMN_12895	0.87	+0.8
2,477,077	-	uvrA	OKFHMN_12895	0.87	+0.4
2,477,077	-	uvrA	OKFHMN_12895	0.87	-1.6
2,477,077	-	uvrA	OKFHMN_12895	0.87	+0.9
2,477,178	+				-1.5
2,477,179	-				-1.7
2,477,179	-				-1.0
2,477,240	-				+0.2
2,477,240	-				+0.5
2,477,246	+				-0.2
2,477,303	+				+1.2
2,477,303	+				-0.0
2,477,304	-				+0.6
2,477,412	-				+0.0
2,477,497	-				+1.9
2,477,516	-	yjbR	OKFHMN_12900	0.11	+0.9
2,477,535	-	yjbR	OKFHMN_12900	0.17	+0.9
2,477,555	+	yjbR	OKFHMN_12900	0.22	+0.1
2,477,653	+	yjbR	OKFHMN_12900	0.50	+0.8
2,477,708	-	yjbR	OKFHMN_12900	0.65	+0.1
2,477,731	+	yjbR	OKFHMN_12900	0.71	+1.2
2,477,732	-	yjbR	OKFHMN_12900	0.72	-1.0
2,477,813	-				+0.1
2,477,848	+				-3.3
2,477,929	-	yjbQ	OKFHMN_12905	0.22	-0.2
2,477,937	+	yjbQ	OKFHMN_12905	0.24	-0.5
2,477,937	+	yjbQ	OKFHMN_12905	0.24	+0.3
2,477,950	+	yjbQ	OKFHMN_12905	0.27	-0.1
2,477,951	-	yjbQ	OKFHMN_12905	0.28	+0.2
2,477,951	-	yjbQ	OKFHMN_12905	0.28	+0.4
2,477,983	-	yjbQ	OKFHMN_12905	0.35	+1.0
2,477,994	+	yjbQ	OKFHMN_12905	0.38	-1.0
2,478,011	+	yjbQ	OKFHMN_12905	0.42	+0.5
2,478,011	+	yjbQ	OKFHMN_12905	0.42	+0.2
2,478,099	+	yjbQ	OKFHMN_12905	0.63	+0.6
2,478,100	-	yjbQ	OKFHMN_12905	0.63	+2.2
2,478,100	-	yjbQ	OKFHMN_12905	0.63	+0.1
2,478,120	+	yjbQ	OKFHMN_12905	0.68	+0.7
2,478,120	+	yjbQ	OKFHMN_12905	0.68	+0.6
2,478,121	-	yjbQ	OKFHMN_12905	0.68	+0.3
2,478,121	-	yjbQ	OKFHMN_12905	0.68	-0.1
2,478,121	-	yjbQ	OKFHMN_12905	0.68	+0.4
2,478,121	-	yjbQ	OKFHMN_12905	0.68	+0.1
2,478,278	+				+0.4
2,478,424	+				+0.9
2,478,425	-				-0.2
2,478,488	+	aphA	OKFHMN_12910	0.18	+0.4
2,478,489	-	aphA	OKFHMN_12910	0.18	+0.3
2,478,567	-	aphA	OKFHMN_12910	0.29	-0.2
2,478,608	+	aphA	OKFHMN_12910	0.34	-0.6
2,478,696	+	aphA	OKFHMN_12910	0.47	-0.5
2,478,697	-	aphA	OKFHMN_12910	0.47	-1.7
2,478,777	+	aphA	OKFHMN_12910	0.58	-2.4
2,478,855	+	aphA	OKFHMN_12910	0.69	+0.3
2,478,856	-	aphA	OKFHMN_12910	0.69	+0.1
2,478,972	-	aphA	OKFHMN_12910	0.85	+1.1