Strain Fitness in Escherichia coli ECRC100 around OKFHMN_11660

Experiment: L-Arabinose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose
2,212,731	+	uvrD	OKFHMN_11655	0.58	+0.4
2,212,748	-	uvrD	OKFHMN_11655	0.59	+0.7
2,212,783	+	uvrD	OKFHMN_11655	0.61	+0.5
2,212,840	+	uvrD	OKFHMN_11655	0.63	-0.7
2,212,977	+	uvrD	OKFHMN_11655	0.70	+0.2
2,212,977	+	uvrD	OKFHMN_11655	0.70	+0.2
2,212,977	+	uvrD	OKFHMN_11655	0.70	+0.2
2,213,114	-	uvrD	OKFHMN_11655	0.76	+0.9
2,213,131	-	uvrD	OKFHMN_11655	0.77	+0.8
2,213,235	+	uvrD	OKFHMN_11655	0.82	+0.2
2,213,267	+	uvrD	OKFHMN_11655	0.84	+0.2
2,213,268	-	uvrD	OKFHMN_11655	0.84	-0.0
2,213,271	+	uvrD	OKFHMN_11655	0.84	-2.9
2,213,271	+	uvrD	OKFHMN_11655	0.84	+0.5
2,213,271	+	uvrD	OKFHMN_11655	0.84	+0.3
2,213,339	+	uvrD	OKFHMN_11655	0.87	-0.2
2,213,339	+	uvrD	OKFHMN_11655	0.87	+1.4
2,213,356	-	uvrD	OKFHMN_11655	0.88	+1.1
2,213,374	-	uvrD	OKFHMN_11655	0.89	-1.2
2,213,375	+	uvrD	OKFHMN_11655	0.89	-0.0
2,213,375	+	uvrD	OKFHMN_11655	0.89	-0.4
2,213,375	+	uvrD	OKFHMN_11655	0.89	+0.4
2,213,376	-	uvrD	OKFHMN_11655	0.89	-0.1
2,213,479	-				-0.4
2,213,479	-				-0.1
2,213,488	-				-0.2
2,213,488	-				-2.4
2,213,488	-				+0.5
2,213,853	+				+0.7
2,213,854	-				-0.5
2,213,857	-				+0.2
2,213,964	-				-0.6
2,213,972	+				+0.2
2,213,981	+				+0.9
2,213,998	-				+0.3
2,214,006	+				+0.7
2,214,058	+				+0.5
2,214,058	+				-1.4
2,214,059	-				+1.0
2,214,077	+				+0.7
2,214,179	+				+1.6
2,214,179	+				-0.5
2,214,268	+	yprA	OKFHMN_11660	0.10	+3.0
2,214,275	-	yprA	OKFHMN_11660	0.10	+0.1
2,214,275	-	yprA	OKFHMN_11660	0.10	-0.0
2,214,355	-	yprA	OKFHMN_11660	0.12	+0.4
2,214,385	+	yprA	OKFHMN_11660	0.12	-1.0
2,214,450	-	yprA	OKFHMN_11660	0.13	-0.7
2,214,465	-	yprA	OKFHMN_11660	0.13	-1.3
2,214,474	-	yprA	OKFHMN_11660	0.14	-3.1
2,214,527	+	yprA	OKFHMN_11660	0.14	-0.6
2,214,671	+	yprA	OKFHMN_11660	0.17	-0.5
2,214,699	+	yprA	OKFHMN_11660	0.17	+0.1
2,214,699	+	yprA	OKFHMN_11660	0.17	+0.7
2,214,700	-	yprA	OKFHMN_11660	0.17	+2.1
2,214,706	+	yprA	OKFHMN_11660	0.17	+1.0
2,214,707	-	yprA	OKFHMN_11660	0.17	+1.0
2,214,707	-	yprA	OKFHMN_11660	0.17	-1.1
2,214,764	+	yprA	OKFHMN_11660	0.18	+0.4
2,214,801	-	yprA	OKFHMN_11660	0.19	+0.2
2,214,801	-	yprA	OKFHMN_11660	0.19	+0.3
2,214,801	-	yprA	OKFHMN_11660	0.19	+0.5
2,214,801	-	yprA	OKFHMN_11660	0.19	+0.3
2,214,801	-	yprA	OKFHMN_11660	0.19	-0.2
2,214,804	-	yprA	OKFHMN_11660	0.19	-0.5
2,214,872	+	yprA	OKFHMN_11660	0.20	-1.3
2,214,872	+	yprA	OKFHMN_11660	0.20	-1.2
2,214,873	-	yprA	OKFHMN_11660	0.20	-3.6
2,214,876	-	yprA	OKFHMN_11660	0.20	+0.8
2,214,939	+	yprA	OKFHMN_11660	0.21	-0.3
2,214,939	+	yprA	OKFHMN_11660	0.21	+1.9
2,214,939	+	yprA	OKFHMN_11660	0.21	-0.3
2,214,940	-	yprA	OKFHMN_11660	0.21	+0.3
2,215,006	+	yprA	OKFHMN_11660	0.22	+0.2
2,215,049	-	yprA	OKFHMN_11660	0.23	+0.6
2,215,068	-	yprA	OKFHMN_11660	0.23	+1.3
2,215,092	+	yprA	OKFHMN_11660	0.23	-1.2
2,215,093	-	yprA	OKFHMN_11660	0.23	+1.1
2,215,093	-	yprA	OKFHMN_11660	0.23	-0.3
2,215,154	+	yprA	OKFHMN_11660	0.24	-0.0
2,215,187	-	yprA	OKFHMN_11660	0.25	+0.3
2,215,277	-	yprA	OKFHMN_11660	0.26	+0.4
2,215,277	-	yprA	OKFHMN_11660	0.26	-0.1
2,215,277	-	yprA	OKFHMN_11660	0.26	+0.6
2,215,284	-	yprA	OKFHMN_11660	0.26	+0.1
2,215,339	+	yprA	OKFHMN_11660	0.27	-1.2
2,215,339	+	yprA	OKFHMN_11660	0.27	+0.1
2,215,340	-	yprA	OKFHMN_11660	0.27	-0.5
2,215,396	+	yprA	OKFHMN_11660	0.28	+1.2
2,215,396	+	yprA	OKFHMN_11660	0.28	-0.5
2,215,403	-	yprA	OKFHMN_11660	0.28	+0.1
2,215,438	+	yprA	OKFHMN_11660	0.29	+1.0
2,215,512	-	yprA	OKFHMN_11660	0.30	+0.8
2,215,662	+	yprA	OKFHMN_11660	0.32	+0.1
2,215,690	-	yprA	OKFHMN_11660	0.33	+0.2
2,215,768	+	yprA	OKFHMN_11660	0.34	-1.3
2,215,844	-	yprA	OKFHMN_11660	0.35	-1.7
2,215,848	-	yprA	OKFHMN_11660	0.35	-0.1
2,215,886	+	yprA	OKFHMN_11660	0.36	+0.5
2,215,886	+	yprA	OKFHMN_11660	0.36	+0.9
2,215,956	-	yprA	OKFHMN_11660	0.37	-2.4
2,215,956	-	yprA	OKFHMN_11660	0.37	+0.7
2,216,091	+	yprA	OKFHMN_11660	0.39	-0.4
2,216,099	+	yprA	OKFHMN_11660	0.39	+0.4
2,216,119	+	yprA	OKFHMN_11660	0.40	-0.5
2,216,120	-	yprA	OKFHMN_11660	0.40	+0.0
2,216,120	-	yprA	OKFHMN_11660	0.40	+0.1
2,216,166	-	yprA	OKFHMN_11660	0.40	-0.0
2,216,334	+	yprA	OKFHMN_11660	0.43	-0.0
2,216,477	+	yprA	OKFHMN_11660	0.45	-1.7
2,216,478	-	yprA	OKFHMN_11660	0.45	-0.3
2,216,511	-	yprA	OKFHMN_11660	0.46	+0.5
2,216,591	+	yprA	OKFHMN_11660	0.47	+0.3
2,216,628	-	yprA	OKFHMN_11660	0.48	-0.7
2,216,817	+	yprA	OKFHMN_11660	0.51	-1.9
2,216,885	+	yprA	OKFHMN_11660	0.52	-1.2
2,216,885	+	yprA	OKFHMN_11660	0.52	-0.6
2,217,068	+	yprA	OKFHMN_11660	0.55	+0.6
2,217,211	-	yprA	OKFHMN_11660	0.57	+0.7
2,217,250	-	yprA	OKFHMN_11660	0.57	+0.4
2,217,250	-	yprA	OKFHMN_11660	0.57	+1.1
2,217,269	+	yprA	OKFHMN_11660	0.58	-0.6
2,217,389	-	yprA	OKFHMN_11660	0.60	-0.4
2,217,398	+	yprA	OKFHMN_11660	0.60	-2.4
2,217,416	+	yprA	OKFHMN_11660	0.60	+1.2
2,217,426	-	yprA	OKFHMN_11660	0.60	-1.5
2,217,426	-	yprA	OKFHMN_11660	0.60	+0.2
2,217,427	+	yprA	OKFHMN_11660	0.60	+0.4
2,217,427	+	yprA	OKFHMN_11660	0.60	+0.4
2,217,437	+	yprA	OKFHMN_11660	0.60	+1.3
2,217,438	-	yprA	OKFHMN_11660	0.60	-0.2
2,217,555	+	yprA	OKFHMN_11660	0.62	-0.1
2,217,624	-	yprA	OKFHMN_11660	0.63	-0.5
2,217,686	+	yprA	OKFHMN_11660	0.64	-0.8
2,217,824	+	yprA	OKFHMN_11660	0.66	-0.1
2,217,919	-	yprA	OKFHMN_11660	0.68	+0.1
2,218,046	+	yprA	OKFHMN_11660	0.70	+0.7
2,218,046	+	yprA	OKFHMN_11660	0.70	-1.2
2,218,047	-	yprA	OKFHMN_11660	0.70	-0.9
2,218,148	-	yprA	OKFHMN_11660	0.72	-0.0
2,218,182	-	yprA	OKFHMN_11660	0.72	+0.3
2,218,226	+	yprA	OKFHMN_11660	0.73	+0.7
2,218,280	+	yprA	OKFHMN_11660	0.74	+1.5
2,218,280	+	yprA	OKFHMN_11660	0.74	+0.2
2,218,280	+	yprA	OKFHMN_11660	0.74	+0.0
2,218,325	+	yprA	OKFHMN_11660	0.74	+1.5
2,218,375	+	yprA	OKFHMN_11660	0.75	-1.7
2,218,474	+	yprA	OKFHMN_11660	0.77	+0.4
2,218,475	-	yprA	OKFHMN_11660	0.77	+0.1
2,218,475	-	yprA	OKFHMN_11660	0.77	-3.2
2,218,656	+	yprA	OKFHMN_11660	0.80	+0.2
2,218,797	+	yprA	OKFHMN_11660	0.82	-1.3
2,218,797	+	yprA	OKFHMN_11660	0.82	-3.3
2,218,824	+	yprA	OKFHMN_11660	0.82	+0.0
2,218,934	-	yprA	OKFHMN_11660	0.84	-0.5
2,218,934	-	yprA	OKFHMN_11660	0.84	-0.0
2,219,014	+	yprA	OKFHMN_11660	0.85	+1.6
2,219,026	+	yprA	OKFHMN_11660	0.85	-0.1
2,219,101	+	yprA	OKFHMN_11660	0.87	-1.6
2,219,135	+	yprA	OKFHMN_11660	0.87	-0.8
2,219,178	+	yprA	OKFHMN_11660	0.88	-0.2
2,219,178	+	yprA	OKFHMN_11660	0.88	+0.9
2,219,178	+	yprA	OKFHMN_11660	0.88	+0.2
2,219,178	+	yprA	OKFHMN_11660	0.88	-0.9
2,219,179	-	yprA	OKFHMN_11660	0.88	+0.6
2,219,179	-	yprA	OKFHMN_11660	0.88	+0.1
2,219,179	-	yprA	OKFHMN_11660	0.88	-0.4
2,219,179	-	yprA	OKFHMN_11660	0.88	-1.4
2,219,179	-	yprA	OKFHMN_11660	0.88	-0.4
2,219,179	-	yprA	OKFHMN_11660	0.88	+0.4
2,219,287	+	yprA	OKFHMN_11660	0.90	-0.2
2,219,288	-	yprA	OKFHMN_11660	0.90	-0.5
2,219,393	+				+0.4
2,219,552	+				+0.3
2,219,562	-				-0.5
2,219,609	+				+0.4
2,219,610	-				+0.1
2,219,788	+				-0.0
2,219,788	+				+0.1
2,219,789	-				-0.6
2,219,846	+				+0.5
2,219,852	+				+2.1
2,219,899	-				-1.4
2,219,998	-				+1.1
2,219,998	-				-0.1
2,220,022	+				+0.7
2,220,076	-				+0.6
2,220,109	+				-2.2
2,220,110	-				+0.2
2,220,263	-				+0.3
2,220,269	-				+0.2
2,220,269	-				-0.0
2,220,336	+				+0.0
2,220,337	-				+0.5
2,220,386	+				-0.8
2,220,386	+				+0.1
2,220,386	+				-0.2
2,220,386	+				+0.4
2,220,431	+				-0.0
2,220,558	+	yeeA	OKFHMN_11665	0.12	+0.0
2,220,558	+	yeeA	OKFHMN_11665	0.12	+0.1
2,220,558	+	yeeA	OKFHMN_11665	0.12	-0.3
2,220,558	+	yeeA	OKFHMN_11665	0.12	-2.1
2,220,559	-	yeeA	OKFHMN_11665	0.12	+0.7
2,220,559	-	yeeA	OKFHMN_11665	0.12	+0.5
2,220,559	-	yeeA	OKFHMN_11665	0.12	+2.6
2,220,560	+	yeeA	OKFHMN_11665	0.12	+0.3
2,220,560	+	yeeA	OKFHMN_11665	0.12	+0.8
2,220,560	+	yeeA	OKFHMN_11665	0.12	+0.5
2,220,579	-	yeeA	OKFHMN_11665	0.13	+0.0
2,220,587	+	yeeA	OKFHMN_11665	0.13	+0.5
2,220,590	+	yeeA	OKFHMN_11665	0.13	-0.8
2,220,590	+	yeeA	OKFHMN_11665	0.13	-0.1
2,220,590	+	yeeA	OKFHMN_11665	0.13	+0.2
2,220,591	-	yeeA	OKFHMN_11665	0.13	+0.8
2,220,597	+	yeeA	OKFHMN_11665	0.13	-1.0
2,220,599	+	yeeA	OKFHMN_11665	0.13	+0.6
2,220,599	+	yeeA	OKFHMN_11665	0.13	+0.8
2,220,600	-	yeeA	OKFHMN_11665	0.13	-0.0
2,220,659	+	yeeA	OKFHMN_11665	0.14	-0.0
2,220,660	-	yeeA	OKFHMN_11665	0.14	-0.3
2,220,682	+	yeeA	OKFHMN_11665	0.15	+0.3
2,220,689	-	yeeA	OKFHMN_11665	0.15	+1.4
2,220,715	+	yeeA	OKFHMN_11665	0.15	-0.2
2,220,748	+	yeeA	OKFHMN_11665	0.16	-0.2
2,220,748	+	yeeA	OKFHMN_11665	0.16	+1.4
2,220,748	+	yeeA	OKFHMN_11665	0.16	-0.3
2,220,748	+	yeeA	OKFHMN_11665	0.16	-1.9
2,220,748	+	yeeA	OKFHMN_11665	0.16	+0.1
2,220,749	-	yeeA	OKFHMN_11665	0.16	+0.4
2,220,750	+	yeeA	OKFHMN_11665	0.16	+0.8
2,220,750	+	yeeA	OKFHMN_11665	0.16	+0.1
2,220,751	-	yeeA	OKFHMN_11665	0.16	+0.4
2,220,751	-	yeeA	OKFHMN_11665	0.16	+0.1
2,220,756	+	yeeA	OKFHMN_11665	0.16	+0.5
2,220,764	+	yeeA	OKFHMN_11665	0.16	+1.9
2,220,765	-	yeeA	OKFHMN_11665	0.16	-0.0
2,220,783	-	yeeA	OKFHMN_11665	0.17	+0.2
2,220,805	+	yeeA	OKFHMN_11665	0.17	-0.7
2,220,806	-	yeeA	OKFHMN_11665	0.17	+0.4
2,220,810	-	yeeA	OKFHMN_11665	0.17	-0.1
2,220,810	-	yeeA	OKFHMN_11665	0.17	+0.5
2,220,810	-	yeeA	OKFHMN_11665	0.17	-0.1
2,220,815	-	yeeA	OKFHMN_11665	0.18	-0.0
2,220,815	-	yeeA	OKFHMN_11665	0.18	-1.3
2,220,815	-	yeeA	OKFHMN_11665	0.18	+0.1
2,220,848	-	yeeA	OKFHMN_11665	0.18	+0.3
2,220,851	+	yeeA	OKFHMN_11665	0.18	-0.5
2,220,851	+	yeeA	OKFHMN_11665	0.18	+0.7
2,220,851	+	yeeA	OKFHMN_11665	0.18	-0.7
2,220,862	-	yeeA	OKFHMN_11665	0.18	+1.0
2,220,908	-	yeeA	OKFHMN_11665	0.19	+1.8
2,220,920	-	yeeA	OKFHMN_11665	0.20	+0.5
2,220,930	+	yeeA	OKFHMN_11665	0.20	+0.0