Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt allB and ybbW are separated by 59 nucleotides ybbW and glxR are separated by 168 nucleotides
BNILDI_22315: allB - allantoinase, at 4,483,693 to 4,485,054
allB
BNILDI_22320: ybbW - putative allantoin permease, at 4,485,114 to 4,486,568
ybbW
BNILDI_22325: glxR - 2-hydroxy-3-oxopropionate reductase, at 4,486,737 to 4,487,615
glxR
Position (kb)
4485
4486
4487 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4484.239 kb on + strand, within allB at 4484.268 kb on + strand, within allB at 4484.268 kb on + strand, within allB at 4484.269 kb on - strand, within allB at 4484.269 kb on - strand, within allB at 4484.269 kb on - strand, within allB at 4484.370 kb on - strand, within allB at 4484.423 kb on + strand, within allB at 4484.423 kb on + strand, within allB at 4484.423 kb on + strand, within allB at 4484.423 kb on + strand, within allB at 4484.437 kb on + strand, within allB at 4484.564 kb on - strand, within allB at 4484.669 kb on + strand, within allB at 4484.872 kb on - strand, within allB at 4484.926 kb on - strand at 4484.988 kb on + strand at 4485.708 kb on - strand, within ybbW at 4485.725 kb on + strand, within ybbW at 4485.725 kb on + strand, within ybbW at 4485.725 kb on + strand, within ybbW at 4485.726 kb on - strand, within ybbW at 4485.726 kb on - strand, within ybbW at 4485.726 kb on - strand, within ybbW at 4485.726 kb on - strand, within ybbW at 4485.726 kb on - strand, within ybbW at 4485.755 kb on - strand, within ybbW at 4485.755 kb on - strand, within ybbW at 4485.765 kb on + strand, within ybbW at 4485.766 kb on - strand, within ybbW at 4485.862 kb on - strand, within ybbW at 4485.994 kb on + strand, within ybbW at 4485.995 kb on - strand, within ybbW at 4486.025 kb on + strand, within ybbW at 4486.080 kb on + strand, within ybbW at 4486.081 kb on - strand, within ybbW at 4486.093 kb on - strand, within ybbW at 4486.266 kb on + strand, within ybbW at 4486.386 kb on - strand, within ybbW at 4486.612 kb on + strand at 4486.613 kb on - strand at 4486.749 kb on - strand at 4486.827 kb on - strand, within glxR at 4486.831 kb on - strand, within glxR at 4486.979 kb on + strand, within glxR at 4487.052 kb on + strand, within glxR at 4487.052 kb on + strand, within glxR at 4487.180 kb on + strand, within glxR at 4487.181 kb on - strand, within glxR at 4487.275 kb on + strand, within glxR at 4487.275 kb on + strand, within glxR at 4487.378 kb on + strand, within glxR at 4487.378 kb on + strand, within glxR at 4487.378 kb on + strand, within glxR at 4487.420 kb on + strand, within glxR at 4487.432 kb on + strand, within glxR at 4487.503 kb on - strand, within glxR
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,484,239 + allB BNILDI_22315 0.40 -0.4 4,484,268 + allB BNILDI_22315 0.42 +0.6 4,484,268 + allB BNILDI_22315 0.42 -1.5 4,484,269 - allB BNILDI_22315 0.42 -0.3 4,484,269 - allB BNILDI_22315 0.42 +0.7 4,484,269 - allB BNILDI_22315 0.42 -0.1 4,484,370 - allB BNILDI_22315 0.50 +1.8 4,484,423 + allB BNILDI_22315 0.54 -1.2 4,484,423 + allB BNILDI_22315 0.54 -0.1 4,484,423 + allB BNILDI_22315 0.54 -0.8 4,484,423 + allB BNILDI_22315 0.54 -0.6 4,484,437 + allB BNILDI_22315 0.55 +0.6 4,484,564 - allB BNILDI_22315 0.64 +0.1 4,484,669 + allB BNILDI_22315 0.72 +2.5 4,484,872 - allB BNILDI_22315 0.87 +0.4 4,484,926 - -3.0 4,484,988 + -1.7 4,485,708 - ybbW BNILDI_22320 0.41 -0.5 4,485,725 + ybbW BNILDI_22320 0.42 +0.4 4,485,725 + ybbW BNILDI_22320 0.42 +0.6 4,485,725 + ybbW BNILDI_22320 0.42 +0.5 4,485,726 - ybbW BNILDI_22320 0.42 +2.7 4,485,726 - ybbW BNILDI_22320 0.42 +1.1 4,485,726 - ybbW BNILDI_22320 0.42 +0.9 4,485,726 - ybbW BNILDI_22320 0.42 -0.6 4,485,726 - ybbW BNILDI_22320 0.42 -0.7 4,485,755 - ybbW BNILDI_22320 0.44 +0.3 4,485,755 - ybbW BNILDI_22320 0.44 -0.8 4,485,765 + ybbW BNILDI_22320 0.45 -0.9 4,485,766 - ybbW BNILDI_22320 0.45 +0.1 4,485,862 - ybbW BNILDI_22320 0.51 +0.1 4,485,994 + ybbW BNILDI_22320 0.60 +0.7 4,485,995 - ybbW BNILDI_22320 0.61 +0.0 4,486,025 + ybbW BNILDI_22320 0.63 +0.0 4,486,080 + ybbW BNILDI_22320 0.66 -0.1 4,486,081 - ybbW BNILDI_22320 0.66 +1.3 4,486,093 - ybbW BNILDI_22320 0.67 +0.9 4,486,266 + ybbW BNILDI_22320 0.79 +0.4 4,486,386 - ybbW BNILDI_22320 0.87 -0.2 4,486,612 + -2.7 4,486,613 - -1.6 4,486,749 - -3.1 4,486,827 - glxR BNILDI_22325 0.10 +0.3 4,486,831 - glxR BNILDI_22325 0.11 +0.5 4,486,979 + glxR BNILDI_22325 0.28 +0.7 4,487,052 + glxR BNILDI_22325 0.36 -0.5 4,487,052 + glxR BNILDI_22325 0.36 +1.6 4,487,180 + glxR BNILDI_22325 0.50 -0.4 4,487,181 - glxR BNILDI_22325 0.51 +0.1 4,487,275 + glxR BNILDI_22325 0.61 +0.8 4,487,275 + glxR BNILDI_22325 0.61 -0.1 4,487,378 + glxR BNILDI_22325 0.73 +1.4 4,487,378 + glxR BNILDI_22325 0.73 -0.4 4,487,378 + glxR BNILDI_22325 0.73 +0.6 4,487,420 + glxR BNILDI_22325 0.78 +0.3 4,487,432 + glxR BNILDI_22325 0.79 +0.0 4,487,503 - glxR BNILDI_22325 0.87 -0.0
Or see this region's nucleotide sequence