Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt entS and fepD are separated by 110 nucleotides fepD and fepG overlap by 4 nucleotides fepG and fepC overlap by 4 nucleotides
BNILDI_21970: entS - enterobactin exporter, iron-regulated, at 4,416,238 to 4,417,488
entS
BNILDI_21975: fepD - ferrienterobactin ABC transporter permease, at 4,417,599 to 4,418,603
fepD
BNILDI_21980: fepG - iron-enterobactin ABC transporter permease, at 4,418,600 to 4,419,592
fepG
BNILDI_21985: fepC - ferrienterobactin ABC transporter ATPase, at 4,419,589 to 4,420,404
fepC
Position (kb)
4417
4418
4419 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4416.639 kb on + strand, within entS at 4416.640 kb on - strand, within entS at 4416.757 kb on + strand, within entS at 4416.924 kb on + strand, within entS at 4416.928 kb on - strand, within entS at 4416.928 kb on - strand, within entS at 4416.928 kb on - strand, within entS at 4416.985 kb on + strand, within entS at 4417.058 kb on - strand, within entS at 4417.072 kb on + strand, within entS at 4417.145 kb on - strand, within entS at 4417.148 kb on + strand, within entS at 4417.148 kb on + strand, within entS at 4417.149 kb on - strand, within entS at 4417.149 kb on - strand, within entS at 4417.253 kb on + strand, within entS at 4417.254 kb on - strand, within entS at 4417.423 kb on + strand at 4417.424 kb on - strand at 4417.522 kb on + strand at 4417.523 kb on - strand at 4417.542 kb on + strand at 4417.543 kb on - strand at 4417.801 kb on + strand, within fepD at 4418.051 kb on - strand, within fepD at 4418.180 kb on + strand, within fepD at 4418.180 kb on + strand, within fepD at 4418.181 kb on - strand, within fepD at 4418.185 kb on + strand, within fepD at 4418.314 kb on + strand, within fepD at 4418.315 kb on - strand, within fepD at 4418.419 kb on + strand, within fepD at 4418.420 kb on - strand, within fepD at 4418.420 kb on - strand, within fepD at 4418.583 kb on - strand at 4418.749 kb on + strand, within fepG at 4419.082 kb on + strand, within fepG at 4419.082 kb on + strand, within fepG at 4419.199 kb on + strand, within fepG at 4419.499 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,416,639 + entS BNILDI_21970 0.32 +0.4 4,416,640 - entS BNILDI_21970 0.32 +0.1 4,416,757 + entS BNILDI_21970 0.41 -0.9 4,416,924 + entS BNILDI_21970 0.55 +0.2 4,416,928 - entS BNILDI_21970 0.55 -0.9 4,416,928 - entS BNILDI_21970 0.55 -0.5 4,416,928 - entS BNILDI_21970 0.55 -0.1 4,416,985 + entS BNILDI_21970 0.60 -0.2 4,417,058 - entS BNILDI_21970 0.66 -0.4 4,417,072 + entS BNILDI_21970 0.67 -0.8 4,417,145 - entS BNILDI_21970 0.73 +0.2 4,417,148 + entS BNILDI_21970 0.73 +1.0 4,417,148 + entS BNILDI_21970 0.73 +0.8 4,417,149 - entS BNILDI_21970 0.73 +0.6 4,417,149 - entS BNILDI_21970 0.73 +0.6 4,417,253 + entS BNILDI_21970 0.81 -0.5 4,417,254 - entS BNILDI_21970 0.81 -1.1 4,417,423 + +0.3 4,417,424 - +0.2 4,417,522 + -0.7 4,417,523 - -0.1 4,417,542 + -1.0 4,417,543 - -0.0 4,417,801 + fepD BNILDI_21975 0.20 -1.9 4,418,051 - fepD BNILDI_21975 0.45 -0.0 4,418,180 + fepD BNILDI_21975 0.58 -0.9 4,418,180 + fepD BNILDI_21975 0.58 -0.8 4,418,181 - fepD BNILDI_21975 0.58 +0.2 4,418,185 + fepD BNILDI_21975 0.58 +0.3 4,418,314 + fepD BNILDI_21975 0.71 +1.6 4,418,315 - fepD BNILDI_21975 0.71 -0.6 4,418,419 + fepD BNILDI_21975 0.82 -0.5 4,418,420 - fepD BNILDI_21975 0.82 -2.9 4,418,420 - fepD BNILDI_21975 0.82 -0.5 4,418,583 - -0.7 4,418,749 + fepG BNILDI_21980 0.15 -0.2 4,419,082 + fepG BNILDI_21980 0.49 -1.6 4,419,082 + fepG BNILDI_21980 0.49 -1.2 4,419,199 + fepG BNILDI_21980 0.60 -1.3 4,419,499 + -0.6
Or see this region's nucleotide sequence