Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybhN and ybhL are separated by 35 nucleotides ybhL and ybhL are separated by 204 nucleotides ybhL and moaE are separated by 136 nucleotides moaE and moaD are separated by 1 nucleotides moaD and moaC overlap by 8 nucleotides
BNILDI_20970: ybhN - Inner membrane protein YbhN, at 4,221,840 to 4,222,796
ybhN
BNILDI_20975: ybhL - Inhibitor of apoptosis-promoting Bax1, at 4,222,832 to 4,223,545
ybhL
BNILDI_20980: ybhL - Inner membrane protein YbhL, at 4,223,750 to 4,224,454
ybhL
BNILDI_20985: moaE - molybdopterin synthase catalytic subunit MoaE, at 4,224,591 to 4,225,043
moaE
BNILDI_20990: moaD - molybdopterin synthase sulfur carrier subunit, at 4,225,045 to 4,225,290
moaD
BNILDI_20995: moaC - cyclic pyranopterin monophosphate synthase MoaC, at 4,225,283 to 4,225,768
moaC
Position (kb) 4223
4224
4225 Strain fitness (log2 ratio) -2
-1
0
1 at 4222.805 kb on + strand at 4222.818 kb on - strand at 4222.834 kb on - strand at 4222.873 kb on + strand at 4222.873 kb on + strand at 4222.874 kb on - strand at 4222.915 kb on - strand, within ybhL at 4222.918 kb on - strand, within ybhL at 4223.164 kb on + strand, within ybhL at 4223.247 kb on - strand, within ybhL at 4223.289 kb on + strand, within ybhL at 4223.290 kb on - strand, within ybhL at 4223.294 kb on + strand, within ybhL at 4223.337 kb on - strand, within ybhL at 4223.358 kb on - strand, within ybhL at 4223.358 kb on - strand, within ybhL at 4223.418 kb on + strand, within ybhL at 4223.685 kb on - strand at 4223.904 kb on + strand, within ybhL at 4223.940 kb on + strand, within ybhL at 4223.941 kb on - strand, within ybhL at 4223.944 kb on + strand, within ybhL at 4224.020 kb on - strand, within ybhL at 4224.020 kb on - strand, within ybhL at 4224.112 kb on + strand, within ybhL at 4224.121 kb on + strand, within ybhL at 4224.146 kb on + strand, within ybhL at 4224.146 kb on + strand, within ybhL at 4224.147 kb on - strand, within ybhL at 4224.147 kb on - strand, within ybhL at 4224.147 kb on - strand, within ybhL at 4224.160 kb on + strand, within ybhL at 4224.161 kb on - strand, within ybhL at 4224.203 kb on + strand, within ybhL at 4224.254 kb on + strand, within ybhL at 4224.394 kb on + strand at 4224.395 kb on - strand at 4224.396 kb on + strand at 4224.396 kb on + strand at 4224.397 kb on - strand at 4224.423 kb on - strand at 4224.473 kb on + strand at 4224.481 kb on - strand at 4224.492 kb on - strand at 4224.527 kb on + strand at 4224.537 kb on + strand at 4224.538 kb on - strand at 4224.695 kb on - strand, within moaE at 4224.704 kb on + strand, within moaE at 4224.705 kb on - strand, within moaE at 4225.361 kb on - strand, within moaC at 4225.390 kb on - strand, within moaC
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,222,805 + -1.3 4,222,818 - -0.4 4,222,834 - +0.2 4,222,873 + -2.3 4,222,873 + -0.1 4,222,874 - -0.0 4,222,915 - ybhL BNILDI_20975 0.12 +0.6 4,222,918 - ybhL BNILDI_20975 0.12 +0.7 4,223,164 + ybhL BNILDI_20975 0.46 +0.2 4,223,247 - ybhL BNILDI_20975 0.58 +0.8 4,223,289 + ybhL BNILDI_20975 0.64 -1.7 4,223,290 - ybhL BNILDI_20975 0.64 +0.0 4,223,294 + ybhL BNILDI_20975 0.65 -1.0 4,223,337 - ybhL BNILDI_20975 0.71 +0.9 4,223,358 - ybhL BNILDI_20975 0.74 +0.4 4,223,358 - ybhL BNILDI_20975 0.74 +0.0 4,223,418 + ybhL BNILDI_20975 0.82 -1.7 4,223,685 - -0.5 4,223,904 + ybhL BNILDI_20980 0.22 +0.4 4,223,940 + ybhL BNILDI_20980 0.27 +0.4 4,223,941 - ybhL BNILDI_20980 0.27 -0.0 4,223,944 + ybhL BNILDI_20980 0.28 +0.8 4,224,020 - ybhL BNILDI_20980 0.38 -0.5 4,224,020 - ybhL BNILDI_20980 0.38 +0.3 4,224,112 + ybhL BNILDI_20980 0.51 +0.1 4,224,121 + ybhL BNILDI_20980 0.53 +1.1 4,224,146 + ybhL BNILDI_20980 0.56 -1.0 4,224,146 + ybhL BNILDI_20980 0.56 +0.7 4,224,147 - ybhL BNILDI_20980 0.56 +0.0 4,224,147 - ybhL BNILDI_20980 0.56 +0.2 4,224,147 - ybhL BNILDI_20980 0.56 +1.1 4,224,160 + ybhL BNILDI_20980 0.58 +0.9 4,224,161 - ybhL BNILDI_20980 0.58 -0.4 4,224,203 + ybhL BNILDI_20980 0.64 -0.0 4,224,254 + ybhL BNILDI_20980 0.71 +0.2 4,224,394 + +0.6 4,224,395 - -1.3 4,224,396 + +0.2 4,224,396 + +0.6 4,224,397 - -0.2 4,224,423 - -0.3 4,224,473 + +1.6 4,224,481 - +1.3 4,224,492 - -0.3 4,224,527 + +0.4 4,224,537 + -0.6 4,224,538 - -0.0 4,224,695 - moaE BNILDI_20985 0.23 +1.4 4,224,704 + moaE BNILDI_20985 0.25 +0.6 4,224,705 - moaE BNILDI_20985 0.25 +0.3 4,225,361 - moaC BNILDI_20995 0.16 -0.8 4,225,390 - moaC BNILDI_20995 0.22 +0.7
Or see this region's nucleotide sequence