Strain Fitness in Escherichia coli ECRC62 around BNILDI_19835

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,981,347	+	etk	BNILDI_19830	0.62	-0.1
3,981,347	+	etk	BNILDI_19830	0.62	-0.5
3,981,483	+	etk	BNILDI_19830	0.68	-0.9
3,981,534	-	etk	BNILDI_19830	0.71	+0.3
3,981,621	+	etk	BNILDI_19830	0.75	+0.3
3,981,621	+	etk	BNILDI_19830	0.75	+0.4
3,981,684	+	etk	BNILDI_19830	0.78	+1.1
3,981,699	-	etk	BNILDI_19830	0.78	+0.4
3,981,699	-	etk	BNILDI_19830	0.78	-1.5
3,981,826	-	etk	BNILDI_19830	0.84	-0.8
3,981,846	+	etk	BNILDI_19830	0.85	-1.1
3,982,121	-				-0.2
3,982,127	-				+0.0
3,982,132	+				-0.6
3,982,133	-				-0.5
3,982,134	+				-1.0
3,982,135	-				-1.9
3,982,135	-				+0.3
3,982,138	+				-0.4
3,982,139	-				-0.0
3,982,149	+				-1.3
3,982,150	-				+1.2
3,982,150	-				-0.2
3,982,150	-				-0.1
3,982,154	-				+1.2
3,982,261	+				-0.6
3,982,279	+				+0.1
3,982,415	-	appA	BNILDI_19835	0.10	-0.8
3,982,602	+	appA	BNILDI_19835	0.24	-0.3
3,982,603	-	appA	BNILDI_19835	0.24	+0.6
3,982,628	-	appA	BNILDI_19835	0.26	+0.3
3,982,628	-	appA	BNILDI_19835	0.26	-0.4
3,982,652	+	appA	BNILDI_19835	0.28	-1.4
3,982,652	+	appA	BNILDI_19835	0.28	-0.5
3,982,653	-	appA	BNILDI_19835	0.28	-0.1
3,982,653	-	appA	BNILDI_19835	0.28	+0.5
3,982,778	-	appA	BNILDI_19835	0.38	-0.9
3,982,858	+	appA	BNILDI_19835	0.44	-0.1
3,982,859	-	appA	BNILDI_19835	0.44	+0.8
3,982,859	-	appA	BNILDI_19835	0.44	-0.5
3,982,936	+	appA	BNILDI_19835	0.50	-1.3
3,983,142	+	appA	BNILDI_19835	0.66	-1.2
3,983,146	+	appA	BNILDI_19835	0.66	-0.7
3,983,178	+	appA	BNILDI_19835	0.69	+0.3
3,983,179	-	appA	BNILDI_19835	0.69	-0.6
3,983,182	+	appA	BNILDI_19835	0.69	+1.2
3,983,182	+	appA	BNILDI_19835	0.69	+0.7
3,983,182	+	appA	BNILDI_19835	0.69	-0.0
3,983,183	-	appA	BNILDI_19835	0.69	-0.3
3,983,336	+	appA	BNILDI_19835	0.81	-0.7
3,983,336	+	appA	BNILDI_19835	0.81	-0.1
3,983,348	+	appA	BNILDI_19835	0.82	+0.4
3,983,558	-				+2.5
3,983,569	+				+1.1
3,983,570	-				-0.1
3,983,570	-				-0.4
3,983,570	-				-0.1
3,983,570	-				+0.5
3,983,570	-				+0.3
3,983,570	-				+0.6
3,983,588	-				+0.9
3,983,605	-				-0.6
3,983,605	-				+2.0
3,983,656	-				+0.3
3,983,745	-	cbdX	BNILDI_19840	0.88	-1.4
3,983,745	-	cbdX	BNILDI_19840	0.88	-0.1
3,983,769	+				-0.3
3,983,769	+				-0.1
3,983,769	+				-0.2
3,983,770	-				+1.0
3,983,773	-				-0.2
3,983,773	-				+0.4
3,983,829	+				-0.6
3,983,832	+				+0.9
3,983,847	+				-1.3
3,983,890	+	appB	BNILDI_19845	0.11	+0.3
3,983,890	+	appB	BNILDI_19845	0.11	-0.8
3,983,890	+	appB	BNILDI_19845	0.11	+0.2
3,983,891	-	appB	BNILDI_19845	0.11	-0.6
3,983,891	-	appB	BNILDI_19845	0.11	-0.3
3,983,894	-	appB	BNILDI_19845	0.11	+1.2
3,984,057	+	appB	BNILDI_19845	0.25	+0.3
3,984,058	-	appB	BNILDI_19845	0.26	-2.4
3,984,215	+	appB	BNILDI_19845	0.39	-0.0
3,984,216	-	appB	BNILDI_19845	0.39	+0.4
3,984,229	+	appB	BNILDI_19845	0.41	+1.4
3,984,396	-	appB	BNILDI_19845	0.55	+0.1
3,984,436	-	appB	BNILDI_19845	0.59	+0.3