Strain Fitness in Escherichia coli ECRC62 around BNILDI_19420

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,901,925	-	grxB	BNILDI_19410	0.81	+0.5
3,902,255	-	yceB	BNILDI_19415	0.13	-0.5
3,902,347	-	yceB	BNILDI_19415	0.29	+1.1
3,902,549	+	yceB	BNILDI_19415	0.65	-1.9
3,902,617	+	yceB	BNILDI_19415	0.78	-0.2
3,902,617	+	yceB	BNILDI_19415	0.78	-1.5
3,902,618	-	yceB	BNILDI_19415	0.78	+1.2
3,902,638	+	yceB	BNILDI_19415	0.81	+0.0
3,902,839	+				-0.0
3,902,840	-				-2.7
3,902,870	+				-1.9
3,902,941	+				-2.8
3,902,942	-				-6.0
3,903,033	+	pyrC	BNILDI_19420	0.18	-1.6
3,903,085	+	pyrC	BNILDI_19420	0.23	-1.7
3,903,086	-	pyrC	BNILDI_19420	0.23	-0.8
3,903,086	-	pyrC	BNILDI_19420	0.23	-4.6
3,903,289	-	pyrC	BNILDI_19420	0.42	-2.3
3,903,320	+	pyrC	BNILDI_19420	0.45	-3.1
3,903,321	-	pyrC	BNILDI_19420	0.45	-1.6
3,903,406	+	pyrC	BNILDI_19420	0.53	-2.4
3,903,478	-	pyrC	BNILDI_19420	0.60	-2.4
3,903,508	+	pyrC	BNILDI_19420	0.63	-3.7
3,903,509	-	pyrC	BNILDI_19420	0.63	-3.7
3,903,535	-	pyrC	BNILDI_19420	0.66	-1.8
3,903,535	-	pyrC	BNILDI_19420	0.66	-2.1
3,903,683	-	pyrC	BNILDI_19420	0.80	-1.0
3,903,757	+	pyrC	BNILDI_19420	0.87	-3.0
3,903,872	+				-2.4
3,903,886	-				+0.0
3,903,901	+				-0.4
3,903,918	+				+0.6
3,903,950	-				+1.5
3,903,965	-				-1.2
3,904,073	-	dinI	BNILDI_19425	0.43	+1.0
3,904,098	-	dinI	BNILDI_19425	0.53	+1.0
3,904,145	-	dinI	BNILDI_19425	0.72	-0.7
3,904,215	-				-0.3
3,904,316	-				+0.5
3,904,379	+				+0.5
3,904,416	+				-0.6
3,904,420	+				-0.4
3,904,420	+				+0.1
3,904,421	-				+2.6
3,904,492	-				+0.0
3,904,568	+	bssS	BNILDI_19430	0.25	+0.1
3,904,568	+	bssS	BNILDI_19430	0.25	-0.5
3,904,572	+	bssS	BNILDI_19430	0.27	+0.5
3,904,572	+	bssS	BNILDI_19430	0.27	-0.4
3,904,572	+	bssS	BNILDI_19430	0.27	-3.2
3,904,614	-	bssS	BNILDI_19430	0.44	-0.0
3,904,682	+	bssS	BNILDI_19430	0.70	+3.4
3,904,817	+				+0.5
3,904,818	-				+0.9
3,904,838	-				+0.2
3,904,879	-				-2.6