Strain Fitness in Escherichia coli ECRC62 around BNILDI_18870

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,795,174	-	ycgR	BNILDI_18860	0.63	-0.8
3,795,275	+	ycgR	BNILDI_18860	0.76	+0.1
3,795,276	-	ycgR	BNILDI_18860	0.77	-0.6
3,795,624	+	emtA	BNILDI_18865	0.29	+0.3
3,795,624	+	emtA	BNILDI_18865	0.29	+0.4
3,795,625	-	emtA	BNILDI_18865	0.29	-0.5
3,795,643	-	emtA	BNILDI_18865	0.32	+0.3
3,795,722	-	emtA	BNILDI_18865	0.45	-0.0
3,795,724	+	emtA	BNILDI_18865	0.45	-0.1
3,795,813	-	emtA	BNILDI_18865	0.59	+1.2
3,795,842	-	emtA	BNILDI_18865	0.64	+1.4
3,795,859	+	emtA	BNILDI_18865	0.67	+0.2
3,795,935	+	emtA	BNILDI_18865	0.79	+0.5
3,795,994	+	emtA	BNILDI_18865	0.89	-2.0
3,795,995	-	emtA	BNILDI_18865	0.89	-0.6
3,795,997	-	emtA	BNILDI_18865	0.90	+0.7
3,796,113	-				-0.5
3,796,124	+				-0.2
3,796,126	+				+0.5
3,796,126	+				-0.2
3,796,127	-				+0.1
3,796,177	-				-3.5
3,796,415	-	ldcA	BNILDI_18870	0.28	-2.4
3,796,415	-	ldcA	BNILDI_18870	0.28	-2.2
3,796,745	-	ldcA	BNILDI_18870	0.64	-5.8
3,796,763	-	ldcA	BNILDI_18870	0.66	-2.8
3,796,763	-	ldcA	BNILDI_18870	0.66	-3.9
3,796,792	+	ldcA	BNILDI_18870	0.69	-3.6
3,796,808	+	ldcA	BNILDI_18870	0.71	-4.1
3,796,808	+	ldcA	BNILDI_18870	0.71	-2.4
3,796,844	-	ldcA	BNILDI_18870	0.75	-3.6
3,796,893	-	ldcA	BNILDI_18870	0.80	-4.1
3,797,122	-				+0.0
3,797,133	+				-0.5
3,797,133	+				+2.1
3,797,134	-				+0.8
3,797,134	-				+0.8
3,797,135	+				+0.7
3,797,135	+				-0.4
3,797,136	-				+1.1
3,797,136	-				+0.5
3,797,137	+				-0.7
3,797,138	-				-0.1
3,797,185	+				-1.6
3,797,186	-				-1.5
3,797,190	-				+0.8
3,797,228	+				-0.6
3,797,229	-				+0.9
3,797,231	-				-0.6
3,797,233	+				+0.7
3,797,233	+				+1.5
3,797,234	-				+0.3
3,797,234	-				+0.6
3,797,237	+				+0.6
3,797,238	-				+0.1
3,797,267	+				+0.4
3,797,268	-				-2.0
3,797,336	+				+1.5
3,797,359	+	nhaP2	BNILDI_18875	0.11	-1.2
3,797,359	+	nhaP2	BNILDI_18875	0.11	+0.4
3,797,359	+	nhaP2	BNILDI_18875	0.11	+0.1
3,797,359	+	nhaP2	BNILDI_18875	0.11	-1.0
3,797,359	+	nhaP2	BNILDI_18875	0.11	+0.6
3,797,359	+	nhaP2	BNILDI_18875	0.11	+0.8
3,797,364	-	nhaP2	BNILDI_18875	0.11	+0.6
3,797,364	-	nhaP2	BNILDI_18875	0.11	+1.1
3,797,472	-	nhaP2	BNILDI_18875	0.17	-0.9
3,797,513	+	nhaP2	BNILDI_18875	0.20	-0.3
3,797,537	-	nhaP2	BNILDI_18875	0.21	-2.4
3,797,787	+	nhaP2	BNILDI_18875	0.36	+0.4
3,797,834	-	nhaP2	BNILDI_18875	0.38	-0.1
3,797,851	+	nhaP2	BNILDI_18875	0.39	+1.9
3,797,916	+	nhaP2	BNILDI_18875	0.43	+0.3
3,797,917	-	nhaP2	BNILDI_18875	0.43	-0.1