Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yfaA and yfaT overlap by 4 nucleotides yfaT and yfaS are separated by 143 nucleotides
BNILDI_13640: yfaA - DUF2138 domain-containing protein, at 2,739,833 to 2,741,521
yfaA
BNILDI_13645: yfaT - DUF1175 domain-containing protein, at 2,741,518 to 2,742,141
yfaT
BNILDI_13650: yfaS - Putative alpha-2-macroglobulin-like protein, at 2,742,285 to 2,746,679
yfaS
Position (kb)
2741
2742
2743 Strain fitness (log2 ratio)
-1
0
1
2 at 2740.654 kb on - strand, within yfaA at 2740.705 kb on + strand, within yfaA at 2740.777 kb on + strand, within yfaA at 2740.777 kb on + strand, within yfaA at 2740.778 kb on - strand, within yfaA at 2741.005 kb on + strand, within yfaA at 2741.149 kb on - strand, within yfaA at 2741.277 kb on + strand, within yfaA at 2741.278 kb on - strand, within yfaA at 2741.278 kb on - strand, within yfaA at 2741.278 kb on - strand, within yfaA at 2741.278 kb on - strand, within yfaA at 2741.306 kb on + strand, within yfaA at 2741.309 kb on - strand, within yfaA at 2741.407 kb on - strand at 2741.407 kb on - strand at 2741.621 kb on + strand, within yfaT at 2741.669 kb on - strand, within yfaT at 2741.852 kb on - strand, within yfaT at 2741.907 kb on - strand, within yfaT at 2741.963 kb on + strand, within yfaT at 2741.964 kb on - strand, within yfaT at 2741.992 kb on + strand, within yfaT at 2741.992 kb on + strand, within yfaT at 2741.992 kb on + strand, within yfaT at 2741.993 kb on - strand, within yfaT at 2742.055 kb on - strand, within yfaT at 2742.115 kb on + strand at 2742.213 kb on + strand at 2742.365 kb on + strand at 2742.366 kb on - strand at 2742.366 kb on - strand at 2742.456 kb on - strand at 2742.483 kb on + strand at 2742.512 kb on + strand at 2742.513 kb on - strand at 2742.562 kb on + strand at 2742.563 kb on - strand at 2742.585 kb on - strand at 2742.585 kb on - strand at 2742.602 kb on - strand at 2742.602 kb on - strand at 2742.602 kb on - strand at 2742.753 kb on + strand, within yfaS at 2742.753 kb on + strand, within yfaS at 2742.754 kb on - strand, within yfaS at 2742.787 kb on - strand, within yfaS at 2743.007 kb on + strand, within yfaS at 2743.007 kb on + strand, within yfaS at 2743.007 kb on + strand, within yfaS at 2743.007 kb on + strand, within yfaS at 2743.008 kb on - strand, within yfaS at 2743.027 kb on - strand, within yfaS at 2743.027 kb on - strand, within yfaS at 2743.110 kb on + strand, within yfaS at 2743.110 kb on + strand, within yfaS at 2743.111 kb on - strand, within yfaS at 2743.111 kb on - strand, within yfaS at 2743.112 kb on + strand, within yfaS
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,740,654 - yfaA BNILDI_13640 0.49 -0.4 2,740,705 + yfaA BNILDI_13640 0.52 -0.2 2,740,777 + yfaA BNILDI_13640 0.56 +0.3 2,740,777 + yfaA BNILDI_13640 0.56 -0.3 2,740,778 - yfaA BNILDI_13640 0.56 +0.1 2,741,005 + yfaA BNILDI_13640 0.69 -0.6 2,741,149 - yfaA BNILDI_13640 0.78 -0.0 2,741,277 + yfaA BNILDI_13640 0.85 -0.1 2,741,278 - yfaA BNILDI_13640 0.86 -0.1 2,741,278 - yfaA BNILDI_13640 0.86 -1.0 2,741,278 - yfaA BNILDI_13640 0.86 +0.0 2,741,278 - yfaA BNILDI_13640 0.86 +0.0 2,741,306 + yfaA BNILDI_13640 0.87 +0.9 2,741,309 - yfaA BNILDI_13640 0.87 +0.2 2,741,407 - -0.2 2,741,407 - +0.6 2,741,621 + yfaT BNILDI_13645 0.17 +0.1 2,741,669 - yfaT BNILDI_13645 0.24 +0.4 2,741,852 - yfaT BNILDI_13645 0.54 +0.2 2,741,907 - yfaT BNILDI_13645 0.62 -0.2 2,741,963 + yfaT BNILDI_13645 0.71 -1.7 2,741,964 - yfaT BNILDI_13645 0.71 +0.3 2,741,992 + yfaT BNILDI_13645 0.76 -1.0 2,741,992 + yfaT BNILDI_13645 0.76 -1.4 2,741,992 + yfaT BNILDI_13645 0.76 -0.7 2,741,993 - yfaT BNILDI_13645 0.76 +0.6 2,742,055 - yfaT BNILDI_13645 0.86 +0.7 2,742,115 + +1.2 2,742,213 + +0.9 2,742,365 + -0.5 2,742,366 - +0.4 2,742,366 - +0.6 2,742,456 - +1.8 2,742,483 + -0.6 2,742,512 + -0.3 2,742,513 - -1.7 2,742,562 + +0.1 2,742,563 - +0.7 2,742,585 - -0.0 2,742,585 - -0.1 2,742,602 - +0.1 2,742,602 - +0.1 2,742,602 - -0.3 2,742,753 + yfaS BNILDI_13650 0.11 -1.0 2,742,753 + yfaS BNILDI_13650 0.11 -0.4 2,742,754 - yfaS BNILDI_13650 0.11 -0.1 2,742,787 - yfaS BNILDI_13650 0.11 +1.5 2,743,007 + yfaS BNILDI_13650 0.16 +0.4 2,743,007 + yfaS BNILDI_13650 0.16 +0.3 2,743,007 + yfaS BNILDI_13650 0.16 -0.6 2,743,007 + yfaS BNILDI_13650 0.16 +0.3 2,743,008 - yfaS BNILDI_13650 0.16 -0.8 2,743,027 - yfaS BNILDI_13650 0.17 -0.5 2,743,027 - yfaS BNILDI_13650 0.17 +0.0 2,743,110 + yfaS BNILDI_13650 0.19 +1.5 2,743,110 + yfaS BNILDI_13650 0.19 +0.3 2,743,111 - yfaS BNILDI_13650 0.19 +0.9 2,743,111 - yfaS BNILDI_13650 0.19 -0.2 2,743,112 + yfaS BNILDI_13650 0.19 +0.1
Or see this region's nucleotide sequence