Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt eutS and eutP are separated by 12 nucleotides eutP and eutQ overlap by 26 nucleotides eutQ and eutT overlap by 4 nucleotides eutT and pta overlap by 4 nucleotides
BNILDI_12500: eutS - Bacterial microcompartment shell protein EutS, at 2,511,103 to 2,511,438
eutS
BNILDI_12505: eutP - ethanolamine utilization acetate kinase EutP, at 2,511,451 to 2,511,930
eutP
BNILDI_12510: eutQ - ethanolamine utilization acetate kinase EutQ, at 2,511,905 to 2,512,606
eutQ
BNILDI_12515: eutT - ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT, at 2,512,603 to 2,513,406
eutT
BNILDI_12520: pta - phosphate acetyltransferase, at 2,513,403 to 2,514,419
pta
Position (kb)
2511
2512
2513 Strain fitness (log2 ratio)
-1
0
1 at 2510.941 kb on + strand at 2511.003 kb on - strand at 2511.049 kb on + strand at 2511.050 kb on - strand at 2511.231 kb on + strand, within eutS at 2511.232 kb on - strand, within eutS at 2511.359 kb on + strand, within eutS at 2511.404 kb on + strand, within eutS at 2511.411 kb on + strand at 2511.411 kb on + strand at 2511.505 kb on - strand, within eutP at 2511.524 kb on - strand, within eutP at 2511.524 kb on - strand, within eutP at 2511.525 kb on + strand, within eutP at 2511.525 kb on + strand, within eutP at 2511.644 kb on + strand, within eutP at 2511.644 kb on + strand, within eutP at 2511.645 kb on - strand, within eutP at 2511.658 kb on + strand, within eutP at 2511.658 kb on + strand, within eutP at 2511.748 kb on - strand, within eutP at 2511.831 kb on - strand, within eutP at 2511.932 kb on - strand at 2511.991 kb on + strand, within eutQ at 2512.289 kb on - strand, within eutQ at 2512.388 kb on - strand, within eutQ at 2512.428 kb on - strand, within eutQ at 2512.428 kb on - strand, within eutQ at 2512.571 kb on + strand at 2512.572 kb on - strand at 2512.631 kb on + strand at 2512.644 kb on + strand at 2512.644 kb on + strand at 2513.047 kb on - strand, within eutT at 2513.280 kb on - strand, within eutT
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,510,941 + +0.8 2,511,003 - +1.0 2,511,049 + -1.2 2,511,050 - +0.1 2,511,231 + eutS BNILDI_12500 0.38 +0.9 2,511,232 - eutS BNILDI_12500 0.38 +0.3 2,511,359 + eutS BNILDI_12500 0.76 -0.2 2,511,404 + eutS BNILDI_12500 0.90 +0.0 2,511,411 + -0.6 2,511,411 + +0.7 2,511,505 - eutP BNILDI_12505 0.11 +0.2 2,511,524 - eutP BNILDI_12505 0.15 +1.1 2,511,524 - eutP BNILDI_12505 0.15 -0.3 2,511,525 + eutP BNILDI_12505 0.15 -0.6 2,511,525 + eutP BNILDI_12505 0.15 +0.6 2,511,644 + eutP BNILDI_12505 0.40 +1.0 2,511,644 + eutP BNILDI_12505 0.40 +0.2 2,511,645 - eutP BNILDI_12505 0.40 -0.2 2,511,658 + eutP BNILDI_12505 0.43 +0.3 2,511,658 + eutP BNILDI_12505 0.43 +0.7 2,511,748 - eutP BNILDI_12505 0.62 -0.2 2,511,831 - eutP BNILDI_12505 0.79 -0.6 2,511,932 - -0.1 2,511,991 + eutQ BNILDI_12510 0.12 -1.3 2,512,289 - eutQ BNILDI_12510 0.55 -0.8 2,512,388 - eutQ BNILDI_12510 0.69 +0.1 2,512,428 - eutQ BNILDI_12510 0.75 -1.5 2,512,428 - eutQ BNILDI_12510 0.75 -0.5 2,512,571 + +0.0 2,512,572 - +0.4 2,512,631 + +0.5 2,512,644 + +0.3 2,512,644 + -0.1 2,513,047 - eutT BNILDI_12515 0.55 -0.2 2,513,280 - eutT BNILDI_12515 0.84 +0.4
Or see this region's nucleotide sequence