Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ahr and Leu_trna are separated by 195 nucleotides Leu_trna and BNILDI_07490 are separated by 186 nucleotides
BNILDI_07480: ahr - NADPH-dependent aldehyde reductase Ahr, at 1,492,200 to 1,493,219
ahr
BNILDI_07485: Leu_trna - tRNA-Leu(caa), at 1,493,415 to 1,493,499
_trna
BNILDI_07490: BNILDI_07490 - DUF4102 domain-containing protein, at 1,493,686 to 1,494,276
_07490
Position (kb)
1493
1494
1495 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1492.724 kb on + strand, within ahr at 1492.725 kb on - strand, within ahr at 1492.725 kb on - strand, within ahr at 1492.734 kb on + strand, within ahr at 1492.735 kb on - strand, within ahr at 1492.757 kb on + strand, within ahr at 1492.796 kb on + strand, within ahr at 1492.796 kb on + strand, within ahr at 1492.865 kb on + strand, within ahr at 1493.111 kb on - strand, within ahr at 1493.200 kb on + strand at 1493.201 kb on - strand at 1493.254 kb on + strand at 1493.255 kb on - strand at 1493.255 kb on - strand at 1493.255 kb on - strand at 1493.308 kb on - strand at 1493.383 kb on - strand at 1493.434 kb on + strand, within Leu_trna at 1493.467 kb on + strand, within Leu_trna at 1493.508 kb on + strand at 1493.508 kb on + strand at 1493.556 kb on + strand at 1493.572 kb on + strand at 1493.573 kb on - strand at 1493.574 kb on + strand at 1493.575 kb on - strand at 1493.577 kb on + strand at 1493.578 kb on - strand at 1493.607 kb on + strand at 1493.608 kb on - strand at 1493.608 kb on - strand at 1493.613 kb on + strand at 1493.614 kb on - strand at 1493.621 kb on + strand at 1493.621 kb on + strand at 1493.621 kb on + strand at 1493.621 kb on + strand at 1493.621 kb on + strand at 1493.621 kb on + strand at 1493.621 kb on + strand at 1493.621 kb on + strand at 1493.622 kb on - strand at 1493.622 kb on - strand at 1493.622 kb on - strand at 1493.622 kb on - strand at 1493.622 kb on - strand at 1493.622 kb on - strand at 1493.622 kb on - strand at 1493.622 kb on - strand at 1493.622 kb on - strand at 1493.622 kb on - strand at 1493.641 kb on + strand at 1493.681 kb on + strand at 1493.682 kb on - strand at 1493.737 kb on + strand at 1493.738 kb on - strand at 1493.739 kb on + strand at 1493.739 kb on + strand at 1493.739 kb on + strand at 1493.790 kb on + strand, within BNILDI_07490 at 1493.790 kb on + strand, within BNILDI_07490 at 1493.795 kb on - strand, within BNILDI_07490 at 1493.949 kb on + strand, within BNILDI_07490 at 1494.012 kb on + strand, within BNILDI_07490 at 1494.012 kb on + strand, within BNILDI_07490 at 1494.090 kb on + strand, within BNILDI_07490 at 1494.090 kb on + strand, within BNILDI_07490 at 1494.091 kb on - strand, within BNILDI_07490 at 1494.122 kb on + strand, within BNILDI_07490 at 1494.129 kb on + strand, within BNILDI_07490 at 1494.130 kb on - strand, within BNILDI_07490 at 1494.130 kb on - strand, within BNILDI_07490 at 1494.130 kb on - strand, within BNILDI_07490 at 1494.174 kb on + strand, within BNILDI_07490 at 1494.175 kb on - strand, within BNILDI_07490 at 1494.175 kb on - strand, within BNILDI_07490 at 1494.203 kb on + strand, within BNILDI_07490 at 1494.246 kb on + strand at 1494.278 kb on - strand at 1494.395 kb on + strand at 1494.395 kb on + strand at 1494.396 kb on - strand at 1494.404 kb on - strand at 1494.428 kb on + strand at 1494.455 kb on + strand at 1494.455 kb on + strand at 1494.455 kb on + strand at 1494.456 kb on - strand at 1494.475 kb on + strand at 1494.569 kb on - strand at 1494.876 kb on + strand at 1495.068 kb on - strand at 1495.086 kb on + strand at 1495.087 kb on - strand at 1495.106 kb on + strand at 1495.106 kb on + strand at 1495.107 kb on - strand at 1495.183 kb on - strand at 1495.183 kb on - strand at 1495.190 kb on + strand at 1495.219 kb on + strand at 1495.253 kb on - strand at 1495.253 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 1,492,724 + ahr BNILDI_07480 0.51 +1.7 1,492,725 - ahr BNILDI_07480 0.51 -0.0 1,492,725 - ahr BNILDI_07480 0.51 +1.3 1,492,734 + ahr BNILDI_07480 0.52 -0.0 1,492,735 - ahr BNILDI_07480 0.52 -0.8 1,492,757 + ahr BNILDI_07480 0.55 -0.0 1,492,796 + ahr BNILDI_07480 0.58 -0.1 1,492,796 + ahr BNILDI_07480 0.58 -1.6 1,492,865 + ahr BNILDI_07480 0.65 -0.2 1,493,111 - ahr BNILDI_07480 0.89 +0.2 1,493,200 + -1.0 1,493,201 - +0.6 1,493,254 + +0.2 1,493,255 - -1.3 1,493,255 - +0.2 1,493,255 - +0.1 1,493,308 - +0.9 1,493,383 - +0.3 1,493,434 + Leu_trna BNILDI_07485 0.22 +0.9 1,493,467 + Leu_trna BNILDI_07485 0.61 -0.6 1,493,508 + +0.3 1,493,508 + +0.2 1,493,556 + +0.0 1,493,572 + -0.3 1,493,573 - +0.1 1,493,574 + -1.3 1,493,575 - -0.4 1,493,577 + -0.0 1,493,578 - -2.1 1,493,607 + +0.1 1,493,608 - +0.2 1,493,608 - +0.2 1,493,613 + +0.2 1,493,614 - +0.5 1,493,621 + +0.6 1,493,621 + -3.0 1,493,621 + +1.2 1,493,621 + +0.1 1,493,621 + +0.0 1,493,621 + -1.0 1,493,621 + -0.2 1,493,621 + -0.1 1,493,622 - +0.8 1,493,622 - -0.8 1,493,622 - -0.1 1,493,622 - -0.2 1,493,622 - +0.7 1,493,622 - +0.4 1,493,622 - +0.2 1,493,622 - +0.6 1,493,622 - -2.4 1,493,622 - -0.3 1,493,641 + +1.2 1,493,681 + -0.6 1,493,682 - +0.9 1,493,737 + -0.0 1,493,738 - -0.0 1,493,739 + +0.1 1,493,739 + +0.0 1,493,739 + +1.6 1,493,790 + BNILDI_07490 0.18 -0.6 1,493,790 + BNILDI_07490 0.18 -1.2 1,493,795 - BNILDI_07490 0.18 -0.4 1,493,949 + BNILDI_07490 0.45 +1.4 1,494,012 + BNILDI_07490 0.55 -0.2 1,494,012 + BNILDI_07490 0.55 -0.8 1,494,090 + BNILDI_07490 0.68 -0.4 1,494,090 + BNILDI_07490 0.68 +0.1 1,494,091 - BNILDI_07490 0.69 +0.1 1,494,122 + BNILDI_07490 0.74 -1.4 1,494,129 + BNILDI_07490 0.75 -0.9 1,494,130 - BNILDI_07490 0.75 -0.4 1,494,130 - BNILDI_07490 0.75 -0.1 1,494,130 - BNILDI_07490 0.75 -0.5 1,494,174 + BNILDI_07490 0.83 +0.3 1,494,175 - BNILDI_07490 0.83 -0.7 1,494,175 - BNILDI_07490 0.83 +0.7 1,494,203 + BNILDI_07490 0.87 +1.2 1,494,246 + -0.5 1,494,278 - -0.2 1,494,395 + -0.1 1,494,395 + +1.8 1,494,396 - +1.2 1,494,404 - -0.0 1,494,428 + -0.6 1,494,455 + +1.4 1,494,455 + -0.2 1,494,455 + +0.2 1,494,456 - +0.6 1,494,475 + -0.4 1,494,569 - +1.7 1,494,876 + +0.1 1,495,068 - -0.2 1,495,086 + -0.7 1,495,087 - +0.4 1,495,106 + +0.6 1,495,106 + +0.8 1,495,107 - -0.2 1,495,183 - +1.1 1,495,183 - +1.1 1,495,190 + -0.1 1,495,219 + +1.1 1,495,253 - +0.0 1,495,253 - +0.8
Or see this region's nucleotide sequence