Strain Fitness in Escherichia coli ECRC62 around BNILDI_06320

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyjbJ and zur are separated by 41 nucleotideszur and yjbM are separated by 317 nucleotidesyjbM and BNILDI_06325 are separated by 23 nucleotides BNILDI_06310: yjbJ - UPF0337 protein YjbJ, at 1,260,913 to 1,261,122 yjbJ BNILDI_06315: zur - zinc uptake transcriptional repressor Zur, at 1,261,164 to 1,261,679 zur BNILDI_06320: yjbM - Uncharacterized protein YjbM, at 1,261,997 to 1,262,251 yjbM BNILDI_06325: BNILDI_06325 - DUF2713 domain-containing protein, at 1,262,275 to 1,262,988 _06325 Position (kb) 1261 1262 1263Strain fitness (log2 ratio) -3 -2 -1 0 1at 1261.015 kb on - strand, within yjbJat 1261.015 kb on - strand, within yjbJat 1261.146 kb on - strandat 1261.146 kb on - strandat 1261.146 kb on - strandat 1261.155 kb on + strandat 1261.155 kb on + strandat 1261.155 kb on + strandat 1261.155 kb on + strandat 1261.277 kb on + strand, within zurat 1261.278 kb on - strand, within zurat 1261.278 kb on - strand, within zurat 1261.278 kb on - strand, within zurat 1261.314 kb on - strand, within zurat 1261.376 kb on + strand, within zurat 1261.377 kb on - strand, within zurat 1261.377 kb on - strand, within zurat 1261.391 kb on + strand, within zurat 1261.391 kb on + strand, within zurat 1261.392 kb on - strand, within zurat 1261.426 kb on + strand, within zurat 1261.426 kb on + strand, within zurat 1261.427 kb on - strand, within zurat 1261.427 kb on - strand, within zurat 1261.427 kb on - strand, within zurat 1261.427 kb on - strand, within zurat 1261.449 kb on - strand, within zurat 1261.489 kb on + strand, within zurat 1261.530 kb on + strand, within zurat 1261.546 kb on + strand, within zurat 1261.620 kb on - strand, within zurat 1261.654 kb on - strandat 1261.718 kb on + strandat 1262.127 kb on + strand, within yjbMat 1262.134 kb on + strand, within yjbMat 1262.291 kb on - strandat 1262.382 kb on + strand, within BNILDI_06325at 1262.534 kb on + strand, within BNILDI_06325at 1262.717 kb on + strand, within BNILDI_06325at 1263.172 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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1,261,015 - yjbJ BNILDI_06310 0.49 +0.4
1,261,015 - yjbJ BNILDI_06310 0.49 +1.0
1,261,146 - -0.4
1,261,146 - -0.2
1,261,146 - +1.6
1,261,155 + -2.3
1,261,155 + +0.8
1,261,155 + -2.0
1,261,155 + -0.6
1,261,277 + zur BNILDI_06315 0.22 +0.4
1,261,278 - zur BNILDI_06315 0.22 -0.0
1,261,278 - zur BNILDI_06315 0.22 +0.1
1,261,278 - zur BNILDI_06315 0.22 -0.3
1,261,314 - zur BNILDI_06315 0.29 -0.1
1,261,376 + zur BNILDI_06315 0.41 +0.3
1,261,377 - zur BNILDI_06315 0.41 -0.3
1,261,377 - zur BNILDI_06315 0.41 -0.9
1,261,391 + zur BNILDI_06315 0.44 +0.4
1,261,391 + zur BNILDI_06315 0.44 -2.7
1,261,392 - zur BNILDI_06315 0.44 +0.5
1,261,426 + zur BNILDI_06315 0.51 +1.3
1,261,426 + zur BNILDI_06315 0.51 -2.4
1,261,427 - zur BNILDI_06315 0.51 +0.3
1,261,427 - zur BNILDI_06315 0.51 +1.7
1,261,427 - zur BNILDI_06315 0.51 +0.0
1,261,427 - zur BNILDI_06315 0.51 -0.1
1,261,449 - zur BNILDI_06315 0.55 -0.1
1,261,489 + zur BNILDI_06315 0.63 +0.4
1,261,530 + zur BNILDI_06315 0.71 -1.2
1,261,546 + zur BNILDI_06315 0.74 -0.7
1,261,620 - zur BNILDI_06315 0.88 -3.0
1,261,654 - -0.7
1,261,718 + +0.5
1,262,127 + yjbM BNILDI_06320 0.51 -0.7
1,262,134 + yjbM BNILDI_06320 0.54 -1.0
1,262,291 - +0.3
1,262,382 + BNILDI_06325 0.15 -0.8
1,262,534 + BNILDI_06325 0.36 +0.6
1,262,717 + BNILDI_06325 0.62 -1.2
1,263,172 - -0.6

Or see this region's nucleotide sequence