Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gpsA and secB overlap by 1 nucleotides secB and grxC are separated by 62 nucleotides grxC and yibN are separated by 141 nucleotides yibN and gpmM are separated by 244 nucleotides
BNILDI_03880: gpsA - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 767,490 to 768,509
gpsA
BNILDI_03885: secB - protein-export chaperone SecB, at 768,509 to 768,976
secB
BNILDI_03890: grxC - glutaredoxin 3, at 769,039 to 769,290
grxC
BNILDI_03895: yibN - Uncharacterized protein YibN, at 769,432 to 769,863
yibN
BNILDI_03900: gpmM - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 770,108 to 771,652
gpmM
Position (kb) 769
770 Strain fitness (log2 ratio) -2
-1
0
1
2 at 768.992 kb on - strand at 769.009 kb on - strand at 769.021 kb on - strand at 769.041 kb on - strand at 769.083 kb on - strand, within grxC at 769.083 kb on - strand, within grxC at 769.272 kb on - strand at 769.296 kb on - strand at 769.296 kb on - strand at 769.367 kb on + strand at 769.373 kb on + strand at 769.428 kb on + strand at 769.433 kb on + strand at 769.498 kb on + strand, within yibN at 769.498 kb on + strand, within yibN at 769.499 kb on - strand, within yibN at 769.499 kb on - strand, within yibN at 769.499 kb on - strand, within yibN at 769.565 kb on - strand, within yibN at 769.644 kb on + strand, within yibN at 769.644 kb on + strand, within yibN at 769.644 kb on + strand, within yibN at 769.645 kb on - strand, within yibN at 769.687 kb on + strand, within yibN at 769.688 kb on - strand, within yibN at 769.728 kb on + strand, within yibN at 769.729 kb on - strand, within yibN at 769.802 kb on - strand, within yibN at 769.818 kb on + strand, within yibN at 769.886 kb on - strand at 769.892 kb on + strand at 769.912 kb on + strand at 769.913 kb on - strand at 769.913 kb on - strand at 769.915 kb on - strand at 769.934 kb on + strand at 770.023 kb on - strand at 770.339 kb on + strand, within gpmM at 770.339 kb on + strand, within gpmM at 770.419 kb on + strand, within gpmM at 770.420 kb on - strand, within gpmM at 770.437 kb on + strand, within gpmM at 770.446 kb on - strand, within gpmM at 770.479 kb on - strand, within gpmM at 770.547 kb on - strand, within gpmM at 770.670 kb on - strand, within gpmM at 770.717 kb on + strand, within gpmM at 770.718 kb on - strand, within gpmM at 770.718 kb on - strand, within gpmM at 770.786 kb on + strand, within gpmM
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 768,992 - -0.2 769,009 - -0.1 769,021 - -1.7 769,041 - +0.2 769,083 - grxC BNILDI_03890 0.17 +0.6 769,083 - grxC BNILDI_03890 0.17 -1.1 769,272 - -1.4 769,296 - -1.4 769,296 - +1.6 769,367 + +0.2 769,373 + +0.3 769,428 + -0.1 769,433 + -0.1 769,498 + yibN BNILDI_03895 0.15 -0.9 769,498 + yibN BNILDI_03895 0.15 +1.4 769,499 - yibN BNILDI_03895 0.16 +0.9 769,499 - yibN BNILDI_03895 0.16 +0.2 769,499 - yibN BNILDI_03895 0.16 -0.1 769,565 - yibN BNILDI_03895 0.31 +0.4 769,644 + yibN BNILDI_03895 0.49 +2.5 769,644 + yibN BNILDI_03895 0.49 +0.2 769,644 + yibN BNILDI_03895 0.49 +0.1 769,645 - yibN BNILDI_03895 0.49 +0.4 769,687 + yibN BNILDI_03895 0.59 +0.3 769,688 - yibN BNILDI_03895 0.59 +0.3 769,728 + yibN BNILDI_03895 0.69 -0.5 769,729 - yibN BNILDI_03895 0.69 -0.5 769,802 - yibN BNILDI_03895 0.86 +0.4 769,818 + yibN BNILDI_03895 0.89 +0.3 769,886 - +0.1 769,892 + +0.7 769,912 + +1.3 769,913 - -0.6 769,913 - -1.5 769,915 - +0.6 769,934 + -1.4 770,023 - -2.3 770,339 + gpmM BNILDI_03900 0.15 +0.5 770,339 + gpmM BNILDI_03900 0.15 -0.3 770,419 + gpmM BNILDI_03900 0.20 +0.5 770,420 - gpmM BNILDI_03900 0.20 -0.1 770,437 + gpmM BNILDI_03900 0.21 -2.6 770,446 - gpmM BNILDI_03900 0.22 +0.3 770,479 - gpmM BNILDI_03900 0.24 -0.6 770,547 - gpmM BNILDI_03900 0.28 -0.3 770,670 - gpmM BNILDI_03900 0.36 +0.2 770,717 + gpmM BNILDI_03900 0.39 +0.7 770,718 - gpmM BNILDI_03900 0.39 +1.2 770,718 - gpmM BNILDI_03900 0.39 -1.6 770,786 + gpmM BNILDI_03900 0.44 -0.1
Or see this region's nucleotide sequence