Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yiaV and yiaW are separated by 5 nucleotides yiaW and BNILDI_03770 are separated by 113 nucleotides BNILDI_03770 and aldB are separated by 218 nucleotides
BNILDI_03760: yiaV - Inner membrane protein YiaV, at 733,595 to 734,731
yiaV
BNILDI_03765: yiaW - Inner membrane protein YiaW, at 734,737 to 735,060
yiaW
BNILDI_03770: BNILDI_03770 - hypothetical protein, at 735,174 to 735,386
_03770
BNILDI_03775: aldB - aldehyde dehydrogenase AldB, at 735,605 to 737,143
aldB
Position (kb) 735
736 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 734.199 kb on - strand, within yiaV at 734.264 kb on + strand, within yiaV at 734.265 kb on - strand, within yiaV at 734.298 kb on + strand, within yiaV at 734.299 kb on - strand, within yiaV at 734.314 kb on + strand, within yiaV at 734.360 kb on + strand, within yiaV at 734.361 kb on - strand, within yiaV at 734.386 kb on + strand, within yiaV at 734.387 kb on - strand, within yiaV at 734.387 kb on - strand, within yiaV at 734.459 kb on + strand, within yiaV at 734.604 kb on - strand, within yiaV at 734.618 kb on - strand at 734.622 kb on - strand at 734.656 kb on + strand at 734.656 kb on + strand at 734.656 kb on + strand at 734.724 kb on - strand at 734.735 kb on + strand at 734.738 kb on + strand at 734.790 kb on + strand, within yiaW at 734.800 kb on + strand, within yiaW at 734.889 kb on + strand, within yiaW at 734.890 kb on - strand, within yiaW at 734.952 kb on + strand, within yiaW at 735.137 kb on + strand at 735.278 kb on + strand, within BNILDI_03770 at 735.311 kb on - strand, within BNILDI_03770 at 735.439 kb on + strand at 735.440 kb on - strand at 735.464 kb on - strand at 735.507 kb on + strand at 735.508 kb on - strand at 735.548 kb on + strand at 735.602 kb on - strand at 735.602 kb on - strand at 735.602 kb on - strand at 735.663 kb on + strand at 735.796 kb on + strand, within aldB at 735.796 kb on + strand, within aldB at 735.797 kb on - strand, within aldB at 735.844 kb on - strand, within aldB at 735.940 kb on + strand, within aldB at 735.941 kb on - strand, within aldB at 735.941 kb on - strand, within aldB at 735.976 kb on - strand, within aldB at 735.978 kb on + strand, within aldB at 736.062 kb on + strand, within aldB at 736.063 kb on - strand, within aldB at 736.185 kb on + strand, within aldB at 736.186 kb on - strand, within aldB at 736.190 kb on - strand, within aldB at 736.190 kb on - strand, within aldB at 736.190 kb on - strand, within aldB at 736.190 kb on - strand, within aldB at 736.318 kb on + strand, within aldB at 736.318 kb on + strand, within aldB at 736.374 kb on + strand, within aldB at 736.374 kb on + strand, within aldB at 736.375 kb on - strand, within aldB at 736.375 kb on - strand, within aldB at 736.381 kb on + strand, within aldB at 736.382 kb on - strand, within aldB at 736.382 kb on - strand, within aldB at 736.382 kb on - strand, within aldB
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 734,199 - yiaV BNILDI_03760 0.53 -0.3 734,264 + yiaV BNILDI_03760 0.59 +1.1 734,265 - yiaV BNILDI_03760 0.59 -0.8 734,298 + yiaV BNILDI_03760 0.62 +0.3 734,299 - yiaV BNILDI_03760 0.62 -0.5 734,314 + yiaV BNILDI_03760 0.63 +0.4 734,360 + yiaV BNILDI_03760 0.67 +0.4 734,361 - yiaV BNILDI_03760 0.67 -0.2 734,386 + yiaV BNILDI_03760 0.70 +0.3 734,387 - yiaV BNILDI_03760 0.70 -0.2 734,387 - yiaV BNILDI_03760 0.70 -1.6 734,459 + yiaV BNILDI_03760 0.76 +0.0 734,604 - yiaV BNILDI_03760 0.89 +0.8 734,618 - -0.5 734,622 - +0.0 734,656 + +0.4 734,656 + +0.8 734,656 + -0.9 734,724 - +1.5 734,735 + +0.9 734,738 + +1.2 734,790 + yiaW BNILDI_03765 0.16 +0.1 734,800 + yiaW BNILDI_03765 0.19 -0.1 734,889 + yiaW BNILDI_03765 0.47 +0.6 734,890 - yiaW BNILDI_03765 0.47 +0.2 734,952 + yiaW BNILDI_03765 0.66 -0.0 735,137 + -0.3 735,278 + BNILDI_03770 0.49 -0.6 735,311 - BNILDI_03770 0.64 -1.1 735,439 + -0.3 735,440 - +1.4 735,464 - +0.5 735,507 + +0.6 735,508 - +0.1 735,548 + +0.5 735,602 - +0.9 735,602 - -0.3 735,602 - +0.0 735,663 + +0.4 735,796 + aldB BNILDI_03775 0.12 +0.2 735,796 + aldB BNILDI_03775 0.12 -1.8 735,797 - aldB BNILDI_03775 0.12 -0.1 735,844 - aldB BNILDI_03775 0.16 -0.3 735,940 + aldB BNILDI_03775 0.22 +0.8 735,941 - aldB BNILDI_03775 0.22 +0.2 735,941 - aldB BNILDI_03775 0.22 -3.1 735,976 - aldB BNILDI_03775 0.24 -0.7 735,978 + aldB BNILDI_03775 0.24 +0.7 736,062 + aldB BNILDI_03775 0.30 -0.4 736,063 - aldB BNILDI_03775 0.30 +0.7 736,185 + aldB BNILDI_03775 0.38 -0.7 736,186 - aldB BNILDI_03775 0.38 -0.4 736,190 - aldB BNILDI_03775 0.38 -0.8 736,190 - aldB BNILDI_03775 0.38 +0.9 736,190 - aldB BNILDI_03775 0.38 -1.5 736,190 - aldB BNILDI_03775 0.38 +0.1 736,318 + aldB BNILDI_03775 0.46 +0.0 736,318 + aldB BNILDI_03775 0.46 +0.0 736,374 + aldB BNILDI_03775 0.50 +0.3 736,374 + aldB BNILDI_03775 0.50 +0.5 736,375 - aldB BNILDI_03775 0.50 -0.2 736,375 - aldB BNILDI_03775 0.50 -0.6 736,381 + aldB BNILDI_03775 0.50 -0.0 736,382 - aldB BNILDI_03775 0.50 -0.6 736,382 - aldB BNILDI_03775 0.50 +0.9 736,382 - aldB BNILDI_03775 0.50 +0.2
Or see this region's nucleotide sequence