Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BNILDI_03255 and BNILDI_03260 are separated by 580 nucleotides BNILDI_03260 and slp are separated by 623 nucleotides
BNILDI_03255: BNILDI_03255 - putative permease, at 630,563 to 631,564
_03255
BNILDI_03260: BNILDI_03260 - YhiS, at 632,145 to 632,990
_03260
BNILDI_03265: slp - outer membrane lipoprotein Slp, at 633,614 to 634,180
slp
Position (kb) 632
633 Strain fitness (log2 ratio) -2
-1
0
1 at 631.153 kb on + strand, within BNILDI_03255 at 631.154 kb on - strand, within BNILDI_03255 at 631.154 kb on - strand, within BNILDI_03255 at 631.154 kb on - strand, within BNILDI_03255 at 631.154 kb on - strand, within BNILDI_03255 at 631.171 kb on - strand, within BNILDI_03255 at 631.207 kb on - strand, within BNILDI_03255 at 631.207 kb on - strand, within BNILDI_03255 at 631.231 kb on - strand, within BNILDI_03255 at 631.233 kb on + strand, within BNILDI_03255 at 631.233 kb on + strand, within BNILDI_03255 at 631.247 kb on - strand, within BNILDI_03255 at 631.297 kb on + strand, within BNILDI_03255 at 631.344 kb on - strand, within BNILDI_03255 at 631.494 kb on + strand at 631.513 kb on + strand at 631.515 kb on + strand at 631.516 kb on - strand at 631.516 kb on - strand at 631.519 kb on - strand at 631.566 kb on + strand at 631.615 kb on + strand at 631.620 kb on - strand at 631.668 kb on - strand at 632.178 kb on - strand at 632.463 kb on - strand, within BNILDI_03260 at 633.563 kb on + strand at 633.671 kb on - strand, within slp at 633.938 kb on - strand, within slp
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 631,153 + BNILDI_03255 0.59 +0.7 631,154 - BNILDI_03255 0.59 -1.7 631,154 - BNILDI_03255 0.59 +0.3 631,154 - BNILDI_03255 0.59 -0.2 631,154 - BNILDI_03255 0.59 -2.0 631,171 - BNILDI_03255 0.61 -0.1 631,207 - BNILDI_03255 0.64 -0.2 631,207 - BNILDI_03255 0.64 +0.1 631,231 - BNILDI_03255 0.67 +0.0 631,233 + BNILDI_03255 0.67 +0.7 631,233 + BNILDI_03255 0.67 +0.0 631,247 - BNILDI_03255 0.68 -0.2 631,297 + BNILDI_03255 0.73 +1.1 631,344 - BNILDI_03255 0.78 +0.1 631,494 + -1.2 631,513 + +0.2 631,515 + +0.5 631,516 - +0.6 631,516 - +0.3 631,519 - +0.3 631,566 + +0.5 631,615 + +1.4 631,620 - +0.3 631,668 - +0.3 632,178 - +1.0 632,463 - BNILDI_03260 0.38 -1.4 633,563 + -1.9 633,671 - slp BNILDI_03265 0.10 -0.2 633,938 - slp BNILDI_03265 0.57 -0.0
Or see this region's nucleotide sequence