Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gntX and BNILDI_02740 are separated by 58 nucleotides BNILDI_02740 and gntT are separated by 360 nucleotides gntT and malQ are separated by 44 nucleotides
BNILDI_02735: gntX - DNA utilization protein GntX, at 521,672 to 522,355
gntX
BNILDI_02740: BNILDI_02740 - NfuA family Fe-S biogenesis protein, at 522,414 to 522,989
_02740
BNILDI_02745: gntT - gluconate transporter, at 523,350 to 524,666
gntT
BNILDI_02750: malQ - 4-alpha-glucanotransferase, at 524,711 to 526,795
malQ
Position (kb) 523
524
525 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 522.410 kb on + strand at 522.410 kb on + strand at 522.541 kb on - strand, within BNILDI_02740 at 522.603 kb on + strand, within BNILDI_02740 at 522.616 kb on + strand, within BNILDI_02740 at 522.679 kb on + strand, within BNILDI_02740 at 522.680 kb on - strand, within BNILDI_02740 at 522.750 kb on + strand, within BNILDI_02740 at 522.750 kb on + strand, within BNILDI_02740 at 522.752 kb on + strand, within BNILDI_02740 at 522.981 kb on + strand at 522.981 kb on + strand at 522.984 kb on + strand at 522.984 kb on + strand at 522.987 kb on + strand at 522.988 kb on - strand at 522.988 kb on - strand at 522.988 kb on - strand at 522.988 kb on - strand at 523.117 kb on + strand at 523.118 kb on - strand at 523.118 kb on - strand at 523.118 kb on - strand at 523.235 kb on - strand at 523.358 kb on - strand at 523.488 kb on - strand, within gntT at 523.598 kb on + strand, within gntT at 523.655 kb on - strand, within gntT at 523.690 kb on - strand, within gntT at 523.690 kb on - strand, within gntT at 523.761 kb on + strand, within gntT at 523.761 kb on + strand, within gntT at 523.761 kb on + strand, within gntT at 523.761 kb on + strand, within gntT at 523.762 kb on - strand, within gntT at 523.762 kb on - strand, within gntT at 523.878 kb on + strand, within gntT at 523.878 kb on + strand, within gntT at 523.886 kb on + strand, within gntT at 523.886 kb on + strand, within gntT at 523.886 kb on + strand, within gntT at 523.886 kb on + strand, within gntT at 523.886 kb on + strand, within gntT at 523.887 kb on - strand, within gntT at 523.887 kb on - strand, within gntT at 523.975 kb on - strand, within gntT at 524.047 kb on + strand, within gntT at 524.051 kb on - strand, within gntT at 524.319 kb on + strand, within gntT at 524.319 kb on + strand, within gntT at 524.319 kb on + strand, within gntT at 524.320 kb on - strand, within gntT at 524.320 kb on - strand, within gntT at 524.320 kb on - strand, within gntT at 524.320 kb on - strand, within gntT at 524.560 kb on - strand at 524.565 kb on - strand at 524.615 kb on + strand at 524.635 kb on + strand at 524.654 kb on + strand at 524.713 kb on - strand at 524.713 kb on - strand at 524.713 kb on - strand at 524.827 kb on + strand at 524.835 kb on + strand at 524.851 kb on + strand at 524.852 kb on - strand at 524.891 kb on + strand at 524.926 kb on - strand, within malQ at 524.978 kb on - strand, within malQ at 525.006 kb on + strand, within malQ at 525.006 kb on + strand, within malQ at 525.007 kb on - strand, within malQ at 525.007 kb on - strand, within malQ at 525.007 kb on - strand, within malQ at 525.010 kb on + strand, within malQ at 525.010 kb on + strand, within malQ at 525.072 kb on - strand, within malQ at 525.235 kb on - strand, within malQ at 525.246 kb on + strand, within malQ at 525.247 kb on - strand, within malQ at 525.247 kb on - strand, within malQ at 525.323 kb on - strand, within malQ at 525.337 kb on + strand, within malQ at 525.387 kb on + strand, within malQ at 525.387 kb on + strand, within malQ at 525.388 kb on - strand, within malQ at 525.388 kb on - strand, within malQ at 525.481 kb on + strand, within malQ at 525.513 kb on + strand, within malQ at 525.513 kb on + strand, within malQ at 525.513 kb on + strand, within malQ at 525.533 kb on - strand, within malQ at 525.533 kb on - strand, within malQ at 525.620 kb on + strand, within malQ at 525.620 kb on + strand, within malQ at 525.620 kb on + strand, within malQ at 525.620 kb on + strand, within malQ at 525.621 kb on - strand, within malQ at 525.621 kb on - strand, within malQ at 525.621 kb on - strand, within malQ at 525.621 kb on - strand, within malQ
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 522,410 + -0.4 522,410 + -2.9 522,541 - BNILDI_02740 0.22 +0.6 522,603 + BNILDI_02740 0.33 -0.3 522,616 + BNILDI_02740 0.35 -1.7 522,679 + BNILDI_02740 0.46 -1.7 522,680 - BNILDI_02740 0.46 +0.9 522,750 + BNILDI_02740 0.58 -0.2 522,750 + BNILDI_02740 0.58 -0.3 522,752 + BNILDI_02740 0.59 +0.1 522,981 + -0.3 522,981 + -1.5 522,984 + -0.2 522,984 + -0.7 522,987 + +0.5 522,988 - -0.2 522,988 - -1.1 522,988 - +1.3 522,988 - -0.3 523,117 + -0.1 523,118 - -1.7 523,118 - -1.1 523,118 - -1.2 523,235 - -0.1 523,358 - -0.7 523,488 - gntT BNILDI_02745 0.10 +0.1 523,598 + gntT BNILDI_02745 0.19 -0.7 523,655 - gntT BNILDI_02745 0.23 +0.2 523,690 - gntT BNILDI_02745 0.26 +1.1 523,690 - gntT BNILDI_02745 0.26 +0.4 523,761 + gntT BNILDI_02745 0.31 -0.0 523,761 + gntT BNILDI_02745 0.31 -0.0 523,761 + gntT BNILDI_02745 0.31 +0.4 523,761 + gntT BNILDI_02745 0.31 +0.6 523,762 - gntT BNILDI_02745 0.31 -0.2 523,762 - gntT BNILDI_02745 0.31 +0.8 523,878 + gntT BNILDI_02745 0.40 -0.2 523,878 + gntT BNILDI_02745 0.40 -0.1 523,886 + gntT BNILDI_02745 0.41 +0.3 523,886 + gntT BNILDI_02745 0.41 +0.0 523,886 + gntT BNILDI_02745 0.41 +0.3 523,886 + gntT BNILDI_02745 0.41 -0.8 523,886 + gntT BNILDI_02745 0.41 +0.2 523,887 - gntT BNILDI_02745 0.41 +0.4 523,887 - gntT BNILDI_02745 0.41 -0.2 523,975 - gntT BNILDI_02745 0.47 -0.3 524,047 + gntT BNILDI_02745 0.53 -0.1 524,051 - gntT BNILDI_02745 0.53 -0.8 524,319 + gntT BNILDI_02745 0.74 -0.0 524,319 + gntT BNILDI_02745 0.74 +0.9 524,319 + gntT BNILDI_02745 0.74 +0.2 524,320 - gntT BNILDI_02745 0.74 +0.8 524,320 - gntT BNILDI_02745 0.74 -3.1 524,320 - gntT BNILDI_02745 0.74 +0.1 524,320 - gntT BNILDI_02745 0.74 +1.1 524,560 - +1.2 524,565 - -1.1 524,615 + -0.6 524,635 + +0.1 524,654 + +0.9 524,713 - +0.2 524,713 - -0.2 524,713 - -0.0 524,827 + +0.3 524,835 + -0.3 524,851 + +0.2 524,852 - +0.6 524,891 + +2.6 524,926 - malQ BNILDI_02750 0.10 -1.5 524,978 - malQ BNILDI_02750 0.13 -0.1 525,006 + malQ BNILDI_02750 0.14 -0.4 525,006 + malQ BNILDI_02750 0.14 -1.2 525,007 - malQ BNILDI_02750 0.14 +1.2 525,007 - malQ BNILDI_02750 0.14 -1.6 525,007 - malQ BNILDI_02750 0.14 +0.5 525,010 + malQ BNILDI_02750 0.14 -0.2 525,010 + malQ BNILDI_02750 0.14 +0.2 525,072 - malQ BNILDI_02750 0.17 +0.8 525,235 - malQ BNILDI_02750 0.25 -0.8 525,246 + malQ BNILDI_02750 0.26 -0.4 525,247 - malQ BNILDI_02750 0.26 +0.2 525,247 - malQ BNILDI_02750 0.26 -0.3 525,323 - malQ BNILDI_02750 0.29 -0.1 525,337 + malQ BNILDI_02750 0.30 +0.2 525,387 + malQ BNILDI_02750 0.32 -0.3 525,387 + malQ BNILDI_02750 0.32 +0.6 525,388 - malQ BNILDI_02750 0.32 +0.7 525,388 - malQ BNILDI_02750 0.32 -0.9 525,481 + malQ BNILDI_02750 0.37 +0.9 525,513 + malQ BNILDI_02750 0.38 -0.6 525,513 + malQ BNILDI_02750 0.38 -0.4 525,513 + malQ BNILDI_02750 0.38 +1.0 525,533 - malQ BNILDI_02750 0.39 +2.2 525,533 - malQ BNILDI_02750 0.39 +0.6 525,620 + malQ BNILDI_02750 0.44 -0.4 525,620 + malQ BNILDI_02750 0.44 -0.3 525,620 + malQ BNILDI_02750 0.44 -0.8 525,620 + malQ BNILDI_02750 0.44 +0.1 525,621 - malQ BNILDI_02750 0.44 -0.8 525,621 - malQ BNILDI_02750 0.44 +0.8 525,621 - malQ BNILDI_02750 0.44 +0.3 525,621 - malQ BNILDI_02750 0.44 -0.2
Or see this region's nucleotide sequence