Experiment: L-Rhamnose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_19685 and NOLOHH_19690 are separated by 2 nucleotides NOLOHH_19690 and NOLOHH_19695 overlap by 20 nucleotides
NOLOHH_19685: NOLOHH_19685 - DNA-binding protein, at 3,886,368 to 3,887,774
_19685
NOLOHH_19690: NOLOHH_19690 - terminase, at 3,887,777 to 3,889,078
_19690
NOLOHH_19695: NOLOHH_19695 - terminase small subunit, at 3,889,059 to 3,890,153
_19695
Position (kb)
3887
3888
3889
3890 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3887.084 kb on + strand, within NOLOHH_19685 at 3887.180 kb on + strand, within NOLOHH_19685 at 3887.181 kb on - strand, within NOLOHH_19685 at 3887.183 kb on + strand, within NOLOHH_19685 at 3887.426 kb on - strand, within NOLOHH_19685 at 3887.554 kb on - strand, within NOLOHH_19685 at 3887.736 kb on - strand at 3887.934 kb on - strand, within NOLOHH_19690 at 3888.194 kb on - strand, within NOLOHH_19690 at 3888.319 kb on - strand, within NOLOHH_19690 at 3888.319 kb on - strand, within NOLOHH_19690 at 3888.407 kb on - strand, within NOLOHH_19690 at 3888.407 kb on - strand, within NOLOHH_19690 at 3888.430 kb on + strand, within NOLOHH_19690 at 3888.471 kb on + strand, within NOLOHH_19690 at 3888.526 kb on - strand, within NOLOHH_19690 at 3888.640 kb on + strand, within NOLOHH_19690 at 3888.641 kb on - strand, within NOLOHH_19690 at 3888.776 kb on - strand, within NOLOHH_19690 at 3888.907 kb on - strand, within NOLOHH_19690 at 3888.933 kb on - strand, within NOLOHH_19690 at 3889.227 kb on - strand, within NOLOHH_19695 at 3889.237 kb on - strand, within NOLOHH_19695 at 3889.340 kb on - strand, within NOLOHH_19695 at 3889.340 kb on - strand, within NOLOHH_19695 at 3889.340 kb on - strand, within NOLOHH_19695 at 3889.342 kb on - strand, within NOLOHH_19695 at 3889.382 kb on + strand, within NOLOHH_19695 at 3889.383 kb on - strand, within NOLOHH_19695 at 3889.384 kb on + strand, within NOLOHH_19695 at 3889.466 kb on - strand, within NOLOHH_19695 at 3889.525 kb on - strand, within NOLOHH_19695 at 3889.620 kb on - strand, within NOLOHH_19695 at 3890.032 kb on + strand, within NOLOHH_19695
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose remove 3,887,084 + NOLOHH_19685 0.51 -0.2 3,887,180 + NOLOHH_19685 0.58 +1.1 3,887,181 - NOLOHH_19685 0.58 -0.9 3,887,183 + NOLOHH_19685 0.58 -1.8 3,887,426 - NOLOHH_19685 0.75 -1.4 3,887,554 - NOLOHH_19685 0.84 -3.6 3,887,736 - +0.5 3,887,934 - NOLOHH_19690 0.12 -2.7 3,888,194 - NOLOHH_19690 0.32 -1.1 3,888,319 - NOLOHH_19690 0.42 +0.6 3,888,319 - NOLOHH_19690 0.42 +1.6 3,888,407 - NOLOHH_19690 0.48 +0.7 3,888,407 - NOLOHH_19690 0.48 -2.6 3,888,430 + NOLOHH_19690 0.50 +1.4 3,888,471 + NOLOHH_19690 0.53 -0.8 3,888,526 - NOLOHH_19690 0.58 +1.6 3,888,640 + NOLOHH_19690 0.66 +2.0 3,888,641 - NOLOHH_19690 0.66 +1.1 3,888,776 - NOLOHH_19690 0.77 +1.7 3,888,907 - NOLOHH_19690 0.87 -0.6 3,888,933 - NOLOHH_19690 0.89 +1.1 3,889,227 - NOLOHH_19695 0.15 -0.9 3,889,237 - NOLOHH_19695 0.16 -0.0 3,889,340 - NOLOHH_19695 0.26 -0.6 3,889,340 - NOLOHH_19695 0.26 -0.7 3,889,340 - NOLOHH_19695 0.26 +1.1 3,889,342 - NOLOHH_19695 0.26 +0.9 3,889,382 + NOLOHH_19695 0.29 +1.9 3,889,383 - NOLOHH_19695 0.30 -0.1 3,889,384 + NOLOHH_19695 0.30 -2.7 3,889,466 - NOLOHH_19695 0.37 +0.3 3,889,525 - NOLOHH_19695 0.43 +2.2 3,889,620 - NOLOHH_19695 0.51 +1.3 3,890,032 + NOLOHH_19695 0.89 -2.0
Or see this region's nucleotide sequence