Strain Fitness in Erwinia amylovora T8 around OLJFJH_17955

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
3,769,034	+		OLJFJH_17950	0.62	-1.2
3,769,035	-		OLJFJH_17950	0.62	+1.9
3,769,035	-		OLJFJH_17950	0.62	+1.1
3,769,086	-		OLJFJH_17950	0.65	-0.2
3,769,088	+		OLJFJH_17950	0.65	+0.1
3,769,088	+		OLJFJH_17950	0.65	-0.6
3,769,088	+		OLJFJH_17950	0.65	+1.0
3,769,211	-		OLJFJH_17950	0.72	-0.0
3,769,243	-		OLJFJH_17950	0.74	+4.6
3,769,491	-		OLJFJH_17950	0.87	-0.3
3,769,689	+				+0.4
3,769,770	-				+0.3
3,769,872	-				-0.2
3,769,872	-				-0.7
3,769,887	-				-0.5
3,769,891	+				+0.9
3,769,891	+				-1.2
3,769,891	+				+0.4
3,769,891	+				+0.5
3,769,892	-				+1.3
3,769,892	-				-0.5
3,769,892	-				-0.6
3,770,024	+		OLJFJH_17955	0.24	+3.5
3,770,025	-		OLJFJH_17955	0.24	+0.4
3,770,025	-		OLJFJH_17955	0.24	-1.9
3,770,186	+		OLJFJH_17955	0.83	-2.2
3,770,225	+				+0.2
3,770,416	+				+2.1
3,770,468	+				-0.9
3,770,468	+				-0.8
3,770,497	+				+0.7
3,770,497	+				+0.3
3,770,498	-				+1.3
3,770,498	-				-0.7
3,770,508	+				+0.3
3,770,692	+		OLJFJH_17960	0.11	+0.7
3,770,692	+		OLJFJH_17960	0.11	-0.3
3,770,820	-		OLJFJH_17960	0.16	+0.4
3,770,919	-		OLJFJH_17960	0.20	+0.5
3,771,045	-		OLJFJH_17960	0.26	-1.3
3,771,168	+		OLJFJH_17960	0.31	+0.4
3,771,191	+		OLJFJH_17960	0.32	+0.2
3,771,191	+		OLJFJH_17960	0.32	+0.3
3,771,191	+		OLJFJH_17960	0.32	-1.0
3,771,191	+		OLJFJH_17960	0.32	+0.4
3,771,191	+		OLJFJH_17960	0.32	+0.1
3,771,192	-		OLJFJH_17960	0.32	+0.3
3,771,205	-		OLJFJH_17960	0.32	+0.7