Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_17800 and OLJFJH_17805 are separated by 99 nucleotides OLJFJH_17805 and OLJFJH_17810 overlap by 1 nucleotides OLJFJH_17810 and OLJFJH_17815 are separated by 55 nucleotides
OLJFJH_17800: OLJFJH_17800 - molecular chaperone HtpG, at 3,741,731 to 3,743,605
_17800
OLJFJH_17805: OLJFJH_17805 - recombination mediator RecR, at 3,743,705 to 3,744,310
_17805
OLJFJH_17810: OLJFJH_17810 - YbaB/EbfC family nucleoid-associated protein, at 3,744,310 to 3,744,639
_17810
OLJFJH_17815: OLJFJH_17815 - DNA polymerase III subunit gamma/tau, at 3,744,695 to 3,746,626
_17815
Position (kb)
3744
3745 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3743.431 kb on - strand at 3743.467 kb on + strand at 3743.467 kb on + strand at 3743.527 kb on - strand at 3743.527 kb on - strand at 3743.610 kb on - strand at 3743.657 kb on + strand at 3743.821 kb on - strand, within OLJFJH_17805 at 3743.844 kb on + strand, within OLJFJH_17805 at 3743.844 kb on + strand, within OLJFJH_17805 at 3743.844 kb on + strand, within OLJFJH_17805 at 3743.845 kb on - strand, within OLJFJH_17805 at 3743.845 kb on - strand, within OLJFJH_17805 at 3743.845 kb on - strand, within OLJFJH_17805 at 3743.845 kb on - strand, within OLJFJH_17805 at 3743.990 kb on + strand, within OLJFJH_17805 at 3743.991 kb on - strand, within OLJFJH_17805 at 3744.244 kb on + strand, within OLJFJH_17805 at 3744.345 kb on + strand, within OLJFJH_17810 at 3744.409 kb on - strand, within OLJFJH_17810 at 3744.438 kb on + strand, within OLJFJH_17810 at 3744.462 kb on + strand, within OLJFJH_17810 at 3744.582 kb on + strand, within OLJFJH_17810 at 3744.639 kb on + strand at 3744.639 kb on + strand at 3744.639 kb on + strand at 3744.639 kb on + strand at 3744.639 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 3,743,431 - +0.5 3,743,467 + -1.4 3,743,467 + +0.9 3,743,527 - +0.9 3,743,527 - +0.1 3,743,610 - +0.0 3,743,657 + -2.4 3,743,821 - OLJFJH_17805 0.19 +0.6 3,743,844 + OLJFJH_17805 0.23 -0.5 3,743,844 + OLJFJH_17805 0.23 -0.7 3,743,844 + OLJFJH_17805 0.23 -0.9 3,743,845 - OLJFJH_17805 0.23 +1.1 3,743,845 - OLJFJH_17805 0.23 -0.1 3,743,845 - OLJFJH_17805 0.23 +0.0 3,743,845 - OLJFJH_17805 0.23 +0.5 3,743,990 + OLJFJH_17805 0.47 +0.0 3,743,991 - OLJFJH_17805 0.47 +1.1 3,744,244 + OLJFJH_17805 0.89 -0.2 3,744,345 + OLJFJH_17810 0.11 -0.1 3,744,409 - OLJFJH_17810 0.30 +2.0 3,744,438 + OLJFJH_17810 0.39 -0.6 3,744,462 + OLJFJH_17810 0.46 +1.7 3,744,582 + OLJFJH_17810 0.82 +0.7 3,744,639 + -1.0 3,744,639 + -0.6 3,744,639 + -0.7 3,744,639 + -0.8 3,744,639 + +1.8
Or see this region's nucleotide sequence