Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_17180 and OLJFJH_17185 are separated by 0 nucleotides OLJFJH_17185 and OLJFJH_17190 are separated by 169 nucleotides OLJFJH_17190 and OLJFJH_17195 are separated by 216 nucleotides
OLJFJH_17180: OLJFJH_17180 - glutamate/aspartate ABC transporter permease GltK, at 3,627,138 to 3,627,815
_17180
OLJFJH_17185: OLJFJH_17185 - arginine transporter ATP-binding subunit, at 3,627,816 to 3,628,541
_17185
OLJFJH_17190: OLJFJH_17190 - zinc ribbon-containing protein, at 3,628,711 to 3,629,193
_17190
OLJFJH_17195: OLJFJH_17195 - leucine--tRNA ligase, at 3,629,410 to 3,631,992
_17195
Position (kb)
3628
3629
3630 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7 at 3627.789 kb on + strand at 3627.789 kb on + strand at 3627.793 kb on + strand at 3627.840 kb on - strand at 3627.847 kb on - strand at 3628.039 kb on + strand, within OLJFJH_17185 at 3628.039 kb on + strand, within OLJFJH_17185 at 3628.040 kb on - strand, within OLJFJH_17185 at 3628.040 kb on - strand, within OLJFJH_17185 at 3628.052 kb on - strand, within OLJFJH_17185 at 3628.052 kb on - strand, within OLJFJH_17185 at 3628.129 kb on + strand, within OLJFJH_17185 at 3628.130 kb on - strand, within OLJFJH_17185 at 3628.130 kb on - strand, within OLJFJH_17185 at 3628.130 kb on - strand, within OLJFJH_17185 at 3628.490 kb on + strand at 3628.539 kb on + strand at 3628.539 kb on + strand at 3628.540 kb on - strand at 3628.540 kb on - strand at 3628.583 kb on - strand at 3628.593 kb on - strand at 3628.678 kb on + strand at 3628.678 kb on + strand at 3628.678 kb on + strand at 3628.679 kb on - strand at 3628.679 kb on - strand at 3628.679 kb on - strand at 3628.679 kb on - strand at 3628.679 kb on - strand at 3628.679 kb on - strand at 3628.679 kb on - strand at 3628.734 kb on + strand at 3628.784 kb on + strand, within OLJFJH_17190 at 3628.785 kb on - strand, within OLJFJH_17190 at 3628.854 kb on - strand, within OLJFJH_17190 at 3628.995 kb on + strand, within OLJFJH_17190 at 3628.997 kb on + strand, within OLJFJH_17190 at 3628.998 kb on - strand, within OLJFJH_17190 at 3628.998 kb on - strand, within OLJFJH_17190 at 3628.998 kb on - strand, within OLJFJH_17190 at 3629.065 kb on + strand, within OLJFJH_17190 at 3629.066 kb on - strand, within OLJFJH_17190 at 3629.085 kb on + strand, within OLJFJH_17190 at 3629.175 kb on - strand at 3629.227 kb on - strand at 3629.272 kb on + strand at 3629.273 kb on - strand at 3629.296 kb on - strand at 3629.358 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 3,627,789 + -1.0 3,627,789 + -0.9 3,627,793 + +0.1 3,627,840 - -0.2 3,627,847 - -1.1 3,628,039 + OLJFJH_17185 0.31 -0.7 3,628,039 + OLJFJH_17185 0.31 +0.9 3,628,040 - OLJFJH_17185 0.31 +1.8 3,628,040 - OLJFJH_17185 0.31 -0.4 3,628,052 - OLJFJH_17185 0.33 -0.3 3,628,052 - OLJFJH_17185 0.33 -1.4 3,628,129 + OLJFJH_17185 0.43 +4.7 3,628,130 - OLJFJH_17185 0.43 +1.3 3,628,130 - OLJFJH_17185 0.43 +0.2 3,628,130 - OLJFJH_17185 0.43 +0.9 3,628,490 + -0.5 3,628,539 + +0.5 3,628,539 + -0.0 3,628,540 - -0.6 3,628,540 - +0.7 3,628,583 - +0.3 3,628,593 - -0.2 3,628,678 + -0.1 3,628,678 + -0.1 3,628,678 + -0.8 3,628,679 - +1.4 3,628,679 - +0.6 3,628,679 - +0.4 3,628,679 - +0.3 3,628,679 - +2.5 3,628,679 - +0.2 3,628,679 - +2.1 3,628,734 + -0.9 3,628,784 + OLJFJH_17190 0.15 +0.2 3,628,785 - OLJFJH_17190 0.15 +0.2 3,628,854 - OLJFJH_17190 0.30 +6.9 3,628,995 + OLJFJH_17190 0.59 -0.3 3,628,997 + OLJFJH_17190 0.59 +0.5 3,628,998 - OLJFJH_17190 0.59 -0.1 3,628,998 - OLJFJH_17190 0.59 +0.4 3,628,998 - OLJFJH_17190 0.59 -1.1 3,629,065 + OLJFJH_17190 0.73 +3.7 3,629,066 - OLJFJH_17190 0.73 -0.5 3,629,085 + OLJFJH_17190 0.77 -0.4 3,629,175 - -0.0 3,629,227 - -1.5 3,629,272 + -0.4 3,629,273 - -2.5 3,629,296 - +0.1 3,629,358 + -0.0
Or see this region's nucleotide sequence