Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_15590 and OLJFJH_15595 are separated by 9 nucleotides OLJFJH_15595 and OLJFJH_15600 are separated by 89 nucleotides OLJFJH_15600 and OLJFJH_15605 are separated by 15 nucleotides OLJFJH_15605 and OLJFJH_15610 are separated by 21 nucleotides
OLJFJH_15590: OLJFJH_15590 - flagellar biosynthesis protein FlgA, at 3,289,511 to 3,290,617
_15590
OLJFJH_15595: OLJFJH_15595 - flagellar basal body L-ring protein FlgH, at 3,290,627 to 3,291,328
_15595
OLJFJH_15600: OLJFJH_15600 - flagellar basal-body rod protein FlgG, at 3,291,418 to 3,292,200
_15600
OLJFJH_15605: OLJFJH_15605 - flagellar biosynthesis protein FlgF, at 3,292,216 to 3,292,971
_15605
OLJFJH_15610: OLJFJH_15610 - flagellar hook protein FlgE, at 3,292,993 to 3,294,201
_15610
Position (kb)
3291
3292
3293 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8 at 3290.516 kb on + strand at 3290.517 kb on - strand at 3290.546 kb on - strand at 3290.607 kb on - strand at 3290.607 kb on - strand at 3290.611 kb on + strand at 3290.628 kb on + strand at 3290.629 kb on - strand at 3290.629 kb on - strand at 3290.629 kb on - strand at 3290.639 kb on + strand at 3290.640 kb on - strand at 3290.640 kb on - strand at 3290.707 kb on - strand, within OLJFJH_15595 at 3290.813 kb on - strand, within OLJFJH_15595 at 3290.900 kb on - strand, within OLJFJH_15595 at 3290.900 kb on - strand, within OLJFJH_15595 at 3291.001 kb on + strand, within OLJFJH_15595 at 3291.044 kb on - strand, within OLJFJH_15595 at 3291.106 kb on + strand, within OLJFJH_15595 at 3291.147 kb on + strand, within OLJFJH_15595 at 3291.147 kb on + strand, within OLJFJH_15595 at 3291.147 kb on + strand, within OLJFJH_15595 at 3291.148 kb on - strand, within OLJFJH_15595 at 3291.335 kb on - strand at 3291.346 kb on + strand at 3291.346 kb on + strand at 3291.347 kb on - strand at 3291.350 kb on + strand at 3291.351 kb on - strand at 3291.351 kb on - strand at 3291.354 kb on + strand at 3291.354 kb on + strand at 3291.354 kb on + strand at 3291.354 kb on + strand at 3291.354 kb on + strand at 3291.354 kb on + strand at 3291.354 kb on + strand at 3291.354 kb on + strand at 3291.354 kb on + strand at 3291.354 kb on + strand at 3291.355 kb on - strand at 3291.355 kb on - strand at 3291.355 kb on - strand at 3291.355 kb on - strand at 3291.355 kb on - strand at 3291.355 kb on - strand at 3291.355 kb on - strand at 3291.355 kb on - strand at 3291.355 kb on - strand at 3291.355 kb on - strand at 3291.355 kb on - strand at 3291.456 kb on + strand at 3291.456 kb on + strand at 3291.457 kb on - strand at 3291.468 kb on + strand at 3291.469 kb on - strand at 3291.474 kb on + strand at 3291.475 kb on - strand at 3291.482 kb on + strand at 3291.523 kb on + strand, within OLJFJH_15600 at 3291.548 kb on + strand, within OLJFJH_15600 at 3291.557 kb on + strand, within OLJFJH_15600 at 3291.558 kb on - strand, within OLJFJH_15600 at 3291.725 kb on - strand, within OLJFJH_15600 at 3291.860 kb on + strand, within OLJFJH_15600 at 3292.065 kb on - strand, within OLJFJH_15600 at 3292.146 kb on + strand at 3292.146 kb on + strand at 3292.146 kb on + strand at 3292.146 kb on + strand at 3292.206 kb on - strand at 3292.206 kb on - strand at 3292.315 kb on - strand, within OLJFJH_15605 at 3292.441 kb on - strand, within OLJFJH_15605 at 3292.441 kb on - strand, within OLJFJH_15605 at 3292.535 kb on - strand, within OLJFJH_15605 at 3292.587 kb on + strand, within OLJFJH_15605 at 3292.588 kb on - strand, within OLJFJH_15605 at 3292.627 kb on + strand, within OLJFJH_15605 at 3292.632 kb on + strand, within OLJFJH_15605 at 3292.857 kb on + strand, within OLJFJH_15605 at 3292.955 kb on + strand at 3292.955 kb on + strand at 3292.955 kb on + strand at 3292.955 kb on + strand at 3292.955 kb on + strand at 3292.955 kb on + strand at 3292.956 kb on - strand at 3292.956 kb on - strand at 3292.956 kb on - strand at 3292.956 kb on - strand at 3292.956 kb on - strand at 3292.958 kb on - strand at 3292.972 kb on - strand at 3293.061 kb on - strand at 3293.061 kb on - strand at 3293.061 kb on - strand at 3293.082 kb on + strand at 3293.083 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 3,290,516 + -0.1 3,290,517 - -0.2 3,290,546 - -0.4 3,290,607 - -1.5 3,290,607 - -0.1 3,290,611 + +1.5 3,290,628 + -0.4 3,290,629 - +0.0 3,290,629 - -0.0 3,290,629 - +0.9 3,290,639 + +0.1 3,290,640 - +0.9 3,290,640 - +1.6 3,290,707 - OLJFJH_15595 0.11 -1.0 3,290,813 - OLJFJH_15595 0.26 +0.2 3,290,900 - OLJFJH_15595 0.39 -0.9 3,290,900 - OLJFJH_15595 0.39 -0.2 3,291,001 + OLJFJH_15595 0.53 -0.3 3,291,044 - OLJFJH_15595 0.59 +0.1 3,291,106 + OLJFJH_15595 0.68 -0.2 3,291,147 + OLJFJH_15595 0.74 +0.8 3,291,147 + OLJFJH_15595 0.74 -0.8 3,291,147 + OLJFJH_15595 0.74 +0.8 3,291,148 - OLJFJH_15595 0.74 -0.9 3,291,335 - +0.4 3,291,346 + -1.0 3,291,346 + +0.8 3,291,347 - +8.7 3,291,350 + +0.1 3,291,351 - +0.3 3,291,351 - -0.1 3,291,354 + -0.2 3,291,354 + -0.1 3,291,354 + -0.8 3,291,354 + +0.9 3,291,354 + -0.4 3,291,354 + +0.0 3,291,354 + -0.4 3,291,354 + -0.5 3,291,354 + +4.0 3,291,354 + +0.4 3,291,355 - -0.5 3,291,355 - +0.7 3,291,355 - -0.1 3,291,355 - -0.3 3,291,355 - +0.3 3,291,355 - +1.6 3,291,355 - +0.5 3,291,355 - -0.4 3,291,355 - +0.5 3,291,355 - +0.9 3,291,355 - +0.6 3,291,456 + +0.8 3,291,456 + +0.2 3,291,457 - -0.4 3,291,468 + +0.6 3,291,469 - -0.7 3,291,474 + +0.2 3,291,475 - -0.8 3,291,482 + -0.0 3,291,523 + OLJFJH_15600 0.13 +2.4 3,291,548 + OLJFJH_15600 0.17 +0.3 3,291,557 + OLJFJH_15600 0.18 -0.2 3,291,558 - OLJFJH_15600 0.18 -0.1 3,291,725 - OLJFJH_15600 0.39 +0.3 3,291,860 + OLJFJH_15600 0.56 +1.1 3,292,065 - OLJFJH_15600 0.83 +0.8 3,292,146 + -0.0 3,292,146 + -0.9 3,292,146 + +0.1 3,292,146 + -0.4 3,292,206 - -0.8 3,292,206 - -1.0 3,292,315 - OLJFJH_15605 0.13 +2.1 3,292,441 - OLJFJH_15605 0.30 +2.0 3,292,441 - OLJFJH_15605 0.30 +1.0 3,292,535 - OLJFJH_15605 0.42 -0.3 3,292,587 + OLJFJH_15605 0.49 -0.4 3,292,588 - OLJFJH_15605 0.49 +0.1 3,292,627 + OLJFJH_15605 0.54 -0.0 3,292,632 + OLJFJH_15605 0.55 +0.5 3,292,857 + OLJFJH_15605 0.85 -0.2 3,292,955 + +0.3 3,292,955 + -0.2 3,292,955 + -0.4 3,292,955 + +0.2 3,292,955 + -1.7 3,292,955 + -1.8 3,292,956 - -0.0 3,292,956 - +0.7 3,292,956 - +0.7 3,292,956 - +0.2 3,292,956 - +0.4 3,292,958 - +0.1 3,292,972 - +0.1 3,293,061 - +0.4 3,293,061 - -0.7 3,293,061 - +1.6 3,293,082 + +0.3 3,293,083 - -0.4
Or see this region's nucleotide sequence