Strain Fitness in Erwinia amylovora T8 around OLJFJH_13140

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
2,763,385	-				+0.4
2,763,390	+				-0.2
2,763,390	+				+0.2
2,763,474	+		OLJFJH_13130	0.66	+0.8
2,763,475	-		OLJFJH_13130	0.67	-0.8
2,763,485	-		OLJFJH_13130	0.75	-0.5
2,763,647	+				-0.4
2,763,647	+				-2.1
2,763,647	+				-0.8
2,763,647	+				-0.1
2,763,647	+				-1.2
2,763,647	+				-0.3
2,763,647	+				-0.1
2,763,647	+				+0.3
2,763,647	+				+0.1
2,763,648	-				-0.4
2,763,648	-				+0.9
2,763,648	-				+0.5
2,763,651	+				-0.8
2,763,652	-				+0.5
2,763,652	-				+0.1
2,763,717	-		OLJFJH_13135	0.10	-1.4
2,763,980	+		OLJFJH_13135	0.50	+1.0
2,763,980	+		OLJFJH_13135	0.50	-0.3
2,763,980	+		OLJFJH_13135	0.50	+1.3
2,763,980	+		OLJFJH_13135	0.50	+1.4
2,763,980	+		OLJFJH_13135	0.50	+0.5
2,763,981	-		OLJFJH_13135	0.50	-2.3
2,764,084	+		OLJFJH_13135	0.66	-0.1
2,764,170	+		OLJFJH_13135	0.79	-1.0
2,764,170	+		OLJFJH_13135	0.79	-0.2
2,764,171	-		OLJFJH_13135	0.79	-0.4
2,764,171	-		OLJFJH_13135	0.79	+0.1
2,764,172	+		OLJFJH_13135	0.79	-0.4
2,764,335	-				+1.4
2,764,335	-				-0.0
2,764,336	+				+0.0
2,764,336	+				-1.0
2,764,336	+				+0.1
2,764,336	+				-0.2
2,764,336	+				+0.2
2,764,336	+				-0.7
2,764,337	-				+1.0
2,764,337	-				-1.8
2,764,337	-				+0.2
2,764,337	-				-1.4
2,764,337	-				+0.1
2,764,351	+				-0.7
2,764,397	+				-0.9
2,764,397	+				-0.7
2,764,500	+		OLJFJH_13140	0.29	+5.7
2,764,576	+		OLJFJH_13140	0.46	+0.6
2,764,590	-		OLJFJH_13140	0.49	-1.3
2,764,818	+				-0.4
2,764,823	-				+0.2
2,764,823	-				-0.8
2,764,823	-				-1.1
2,764,954	+				-1.1
2,764,955	-				-0.8
2,764,961	-				+2.5
2,765,534	+				-1.2
2,765,544	+				-0.7
2,765,556	-				+0.7
2,765,627	+				-1.9
2,765,695	-				-0.8
2,765,706	-				+0.9
2,765,706	-				+3.1
2,765,750	+				-0.1
2,765,784	+				+0.6
2,765,785	-				+0.3
2,765,785	-				+1.4
2,765,786	+				-0.9
2,765,786	+				-0.7
2,765,787	-				+1.8
2,765,787	-				-1.0