Strain Fitness in Erwinia amylovora T8 around OLJFJH_12810

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
2,699,221	-		OLJFJH_12805	0.42	-0.3
2,699,581	-		OLJFJH_12805	0.90	-0.5
2,699,586	+				+0.0
2,699,678	+				-0.1
2,699,678	+				+0.9
2,699,678	+				+3.1
2,699,678	+				-0.3
2,699,679	-				-1.3
2,699,679	-				-0.8
2,699,679	-				+0.6
2,699,752	-				+0.5
2,699,883	+				-1.8
2,699,897	-				-2.9
2,699,914	-				-0.3
2,699,914	-				+0.1
2,699,914	-				+0.6
2,700,355	+		OLJFJH_12810	0.35	-0.6
2,700,356	-		OLJFJH_12810	0.35	+2.3
2,700,369	-		OLJFJH_12810	0.36	+2.5
2,700,435	-		OLJFJH_12810	0.45	-0.3
2,700,468	+		OLJFJH_12810	0.49	+2.2
2,700,469	-		OLJFJH_12810	0.49	-0.2
2,700,470	+		OLJFJH_12810	0.49	-0.4
2,700,471	-		OLJFJH_12810	0.49	+1.8
2,700,471	-		OLJFJH_12810	0.49	+0.2
2,700,564	+		OLJFJH_12810	0.61	+1.1
2,700,565	-		OLJFJH_12810	0.61	+0.0
2,700,698	-		OLJFJH_12810	0.77	-0.0
2,700,918	-				-0.2
2,700,925	+				-0.8
2,700,980	+				+0.0
2,701,161	+		OLJFJH_12815	0.17	-1.8
2,701,161	+		OLJFJH_12815	0.17	-0.6
2,701,162	-		OLJFJH_12815	0.17	-0.1
2,701,162	-		OLJFJH_12815	0.17	-0.1
2,701,162	-		OLJFJH_12815	0.17	+0.3
2,701,222	+		OLJFJH_12815	0.23	-0.0
2,701,222	+		OLJFJH_12815	0.23	+0.5
2,701,223	-		OLJFJH_12815	0.23	+0.3
2,701,223	-		OLJFJH_12815	0.23	-0.6
2,701,226	+		OLJFJH_12815	0.23	+0.0
2,701,226	+		OLJFJH_12815	0.23	-0.0
2,701,227	-		OLJFJH_12815	0.24	+0.4
2,701,227	-		OLJFJH_12815	0.24	+1.4
2,701,227	-		OLJFJH_12815	0.24	-0.2
2,701,230	-		OLJFJH_12815	0.24	+7.5
2,701,373	-		OLJFJH_12815	0.39	+2.5
2,701,476	-		OLJFJH_12815	0.49	-0.0
2,701,619	+		OLJFJH_12815	0.64	-0.8
2,701,620	-		OLJFJH_12815	0.64	-0.4
2,701,620	-		OLJFJH_12815	0.64	-1.4
2,701,725	+		OLJFJH_12815	0.75	+0.2
2,701,851	-		OLJFJH_12815	0.88	-0.2