Strain Fitness in Erwinia amylovora T8 around OLJFJH_12700

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
2,672,837	+		OLJFJH_12690	0.77	+0.1
2,672,837	+		OLJFJH_12690	0.77	-1.1
2,672,837	+		OLJFJH_12690	0.77	-0.4
2,672,837	+		OLJFJH_12690	0.77	-0.1
2,672,838	-		OLJFJH_12690	0.77	-2.0
2,672,838	-		OLJFJH_12690	0.77	-0.2
2,672,838	-		OLJFJH_12690	0.77	-0.1
2,672,839	+		OLJFJH_12690	0.77	+0.6
2,672,839	+		OLJFJH_12690	0.77	-0.5
2,672,839	+		OLJFJH_12690	0.77	-1.9
2,672,840	-		OLJFJH_12690	0.77	-1.8
2,672,840	-		OLJFJH_12690	0.77	-0.0
2,672,910	-		OLJFJH_12690	0.83	-0.7
2,672,924	-		OLJFJH_12690	0.84	+1.1
2,672,942	+		OLJFJH_12690	0.85	+0.9
2,672,946	+		OLJFJH_12690	0.85	-0.6
2,673,034	-				-0.0
2,673,098	+				-0.5
2,673,098	+				+6.4
2,673,099	-				+0.5
2,673,099	-				+1.0
2,673,133	+				+0.3
2,673,133	+				-0.0
2,673,133	+				+0.5
2,673,133	+				+0.0
2,673,134	-				-0.1
2,673,137	+				+1.7
2,673,137	+				+0.7
2,673,138	+				-0.5
2,673,212	-		OLJFJH_12695	0.19	+3.7
2,673,397	+		OLJFJH_12695	0.63	-0.1
2,673,397	+		OLJFJH_12695	0.63	+0.4
2,673,398	-		OLJFJH_12695	0.63	-0.3
2,673,398	-		OLJFJH_12695	0.63	+0.3
2,673,417	-		OLJFJH_12695	0.68	-0.1
2,673,417	-		OLJFJH_12695	0.68	+0.5
2,673,454	+		OLJFJH_12695	0.77	+0.2
2,673,511	-				-0.6
2,673,736	+				-0.5
2,673,771	+				+2.0
2,673,772	-				-2.3
2,673,772	-				+0.2
2,673,772	-				+1.4
2,673,798	+		OLJFJH_12700	0.12	+1.5
2,673,798	+		OLJFJH_12700	0.12	+0.2
2,674,179	-		OLJFJH_12700	0.64	+0.9
2,674,179	-		OLJFJH_12700	0.64	-0.5
2,674,179	-		OLJFJH_12700	0.64	+0.0
2,674,305	+		OLJFJH_12700	0.81	+0.0
2,674,306	-		OLJFJH_12700	0.82	+0.1
2,674,306	-		OLJFJH_12700	0.82	-1.0
2,674,306	-		OLJFJH_12700	0.82	+5.0
2,674,306	-		OLJFJH_12700	0.82	-0.2
2,674,422	+				+0.8
2,674,503	-				+0.1
2,674,503	-				-0.3
2,674,503	-				+0.8
2,674,504	+				-0.8
2,674,504	+				-0.1
2,674,504	+				+8.0
2,674,504	+				+1.4
2,674,505	-				+0.6
2,674,505	-				-0.2
2,674,505	-				-1.4
2,674,640	+				-0.4
2,674,822	+				-0.1
2,674,836	+				-0.1
2,674,838	+				-0.4
2,674,858	+				-0.9
2,674,858	+				-0.2
2,674,859	-				+0.8
2,674,919	+				+0.0
2,675,210	+				-1.4
2,675,211	-				-0.7
2,675,272	-		OLJFJH_12705	0.14	-0.6