Strain Fitness in Erwinia amylovora T8 around OLJFJH_12285

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
2,584,279	+				+0.3
2,584,279	+				+1.0
2,584,280	-				-1.8
2,584,646	+		OLJFJH_12275	0.61	+1.5
2,584,684	-		OLJFJH_12275	0.69	+1.7
2,584,684	-		OLJFJH_12275	0.69	+1.1
2,584,774	-		OLJFJH_12275	0.88	-1.2
2,584,811	-				+0.4
2,584,838	-				-0.9
2,584,838	-				-0.8
2,584,848	-				-0.6
2,584,857	-				+2.5
2,584,883	-				-0.3
2,584,922	+				+0.1
2,584,922	+				-0.6
2,584,923	-				+0.6
2,584,955	+				+2.9
2,584,956	-				+1.2
2,584,957	+				-0.4
2,584,957	+				+0.3
2,584,957	+				+0.6
2,584,958	-				-0.7
2,584,962	-				+2.3
2,585,102	+		OLJFJH_12280	0.88	+0.3
2,585,133	+				-0.3
2,585,134	-				+1.6
2,585,134	-				+0.0
2,585,135	+				-0.3
2,585,136	-				+0.6
2,585,378	+		OLJFJH_12285	0.58	+1.8
2,585,685	-				+0.1
2,585,706	+				-0.1
2,585,707	-				-0.1
2,585,737	-				-1.2
2,585,798	+				-0.6
2,585,798	+				+0.7
2,585,798	+				-0.1
2,585,798	+				-0.7
2,585,899	+				+0.3
2,585,936	+				+2.9
2,585,975	+		OLJFJH_12290	0.10	-0.3
2,585,975	+		OLJFJH_12290	0.10	+0.3
2,585,975	+		OLJFJH_12290	0.10	-0.3
2,585,976	-		OLJFJH_12290	0.10	+1.0
2,585,976	-		OLJFJH_12290	0.10	+0.6
2,586,045	+		OLJFJH_12290	0.14	+1.2
2,586,046	-		OLJFJH_12290	0.14	+2.0
2,586,046	-		OLJFJH_12290	0.14	+1.2
2,586,164	+		OLJFJH_12290	0.20	-1.0
2,586,300	-		OLJFJH_12290	0.27	-0.6