Strain Fitness in Erwinia amylovora T8 around OLJFJH_11645

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
2,433,322	-		OLJFJH_11635	0.17	-0.2
2,433,324	+		OLJFJH_11635	0.18	-0.7
2,433,365	+		OLJFJH_11635	0.29	+3.9
2,433,422	+		OLJFJH_11635	0.43	-0.1
2,433,666	-				-0.5
2,433,884	+				+0.0
2,433,884	+				+0.8
2,433,884	+				+0.7
2,433,885	-				+3.6
2,433,885	-				+0.3
2,433,885	-				-0.7
2,433,886	+				+0.4
2,433,886	+				+2.9
2,433,886	+				-0.6
2,433,886	+				-0.1
2,433,887	-				-0.2
2,433,887	-				+0.1
2,433,887	-				-0.4
2,434,044	-				+0.7
2,434,075	-				-0.5
2,434,132	-				+0.8
2,434,639	-		OLJFJH_11645	0.31	+0.2
2,434,731	-		OLJFJH_11645	0.40	-0.6
2,434,832	-		OLJFJH_11645	0.49	+0.3
2,434,851	-		OLJFJH_11645	0.51	-0.4
2,434,883	-		OLJFJH_11645	0.54	+5.1
2,435,014	+		OLJFJH_11645	0.67	+1.0
2,435,090	+		OLJFJH_11645	0.74	-0.4
2,435,357	-				-0.5
2,435,384	+				+0.1
2,435,390	-				-0.2
2,435,403	+				-0.7
2,435,544	+				-0.3
2,435,557	-				-0.6
2,435,573	-				-0.5
2,435,612	+				-0.9
2,435,612	+				+0.7
2,435,612	+				-0.7
2,435,733	+				-0.7
2,435,734	-				-0.5
2,435,774	+				+2.1
2,435,778	-				+0.7
2,435,967	+				-0.6
2,435,967	+				+0.8
2,435,968	-				-1.1
2,436,100	+				+0.3