Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_11565 and OLJFJH_11570 are separated by 13 nucleotides
OLJFJH_11565: OLJFJH_11565 - phosphotransferase RcsD, at 2,420,073 to 2,422,730
_11565
OLJFJH_11570: OLJFJH_11570 - MFS transporter, at 2,422,744 to 2,423,190
_11570
Position (kb)
2422
2423
2424 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2421.831 kb on - strand, within OLJFJH_11565 at 2421.875 kb on + strand, within OLJFJH_11565 at 2421.876 kb on - strand, within OLJFJH_11565 at 2421.938 kb on + strand, within OLJFJH_11565 at 2422.007 kb on + strand, within OLJFJH_11565 at 2422.020 kb on - strand, within OLJFJH_11565 at 2422.112 kb on - strand, within OLJFJH_11565 at 2422.130 kb on + strand, within OLJFJH_11565 at 2422.131 kb on - strand, within OLJFJH_11565 at 2422.131 kb on - strand, within OLJFJH_11565 at 2422.131 kb on - strand, within OLJFJH_11565 at 2422.131 kb on - strand, within OLJFJH_11565 at 2422.141 kb on - strand, within OLJFJH_11565 at 2422.229 kb on + strand, within OLJFJH_11565 at 2422.230 kb on - strand, within OLJFJH_11565 at 2422.310 kb on - strand, within OLJFJH_11565 at 2422.376 kb on + strand, within OLJFJH_11565 at 2422.377 kb on - strand, within OLJFJH_11565 at 2422.444 kb on + strand, within OLJFJH_11565 at 2422.444 kb on + strand, within OLJFJH_11565 at 2422.447 kb on + strand, within OLJFJH_11565 at 2422.447 kb on + strand, within OLJFJH_11565 at 2422.640 kb on + strand at 2422.692 kb on + strand at 2422.718 kb on + strand at 2422.745 kb on + strand at 2422.745 kb on + strand at 2422.746 kb on - strand at 2422.752 kb on + strand at 2422.780 kb on + strand at 2422.832 kb on - strand, within OLJFJH_11570 at 2422.872 kb on + strand, within OLJFJH_11570 at 2422.873 kb on - strand, within OLJFJH_11570 at 2422.887 kb on + strand, within OLJFJH_11570 at 2422.888 kb on - strand, within OLJFJH_11570 at 2423.294 kb on - strand at 2423.298 kb on + strand at 2423.307 kb on - strand at 2423.377 kb on - strand at 2423.571 kb on - strand at 2423.835 kb on - strand at 2423.858 kb on + strand at 2423.859 kb on - strand at 2423.902 kb on - strand at 2423.908 kb on + strand at 2424.118 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 2,421,831 - OLJFJH_11565 0.66 +0.8 2,421,875 + OLJFJH_11565 0.68 +1.0 2,421,876 - OLJFJH_11565 0.68 +1.4 2,421,938 + OLJFJH_11565 0.70 -0.5 2,422,007 + OLJFJH_11565 0.73 +0.5 2,422,020 - OLJFJH_11565 0.73 +1.8 2,422,112 - OLJFJH_11565 0.77 +3.0 2,422,130 + OLJFJH_11565 0.77 +0.2 2,422,131 - OLJFJH_11565 0.77 +1.0 2,422,131 - OLJFJH_11565 0.77 +2.9 2,422,131 - OLJFJH_11565 0.77 +3.5 2,422,131 - OLJFJH_11565 0.77 -0.6 2,422,141 - OLJFJH_11565 0.78 +2.0 2,422,229 + OLJFJH_11565 0.81 +0.7 2,422,230 - OLJFJH_11565 0.81 -0.3 2,422,310 - OLJFJH_11565 0.84 +4.0 2,422,376 + OLJFJH_11565 0.87 +3.5 2,422,377 - OLJFJH_11565 0.87 -1.1 2,422,444 + OLJFJH_11565 0.89 +2.0 2,422,444 + OLJFJH_11565 0.89 +1.0 2,422,447 + OLJFJH_11565 0.89 +2.8 2,422,447 + OLJFJH_11565 0.89 +3.2 2,422,640 + +3.5 2,422,692 + +2.1 2,422,718 + +2.6 2,422,745 + +3.9 2,422,745 + +1.2 2,422,746 - +1.8 2,422,752 + -0.3 2,422,780 + +4.7 2,422,832 - OLJFJH_11570 0.20 -0.5 2,422,872 + OLJFJH_11570 0.29 +0.5 2,422,873 - OLJFJH_11570 0.29 +1.7 2,422,887 + OLJFJH_11570 0.32 +2.7 2,422,888 - OLJFJH_11570 0.32 -0.8 2,423,294 - +0.1 2,423,298 + +2.0 2,423,307 - -0.6 2,423,377 - -0.5 2,423,571 - -0.6 2,423,835 - -0.3 2,423,858 + -0.7 2,423,859 - -0.7 2,423,902 - -1.2 2,423,908 + -1.1 2,424,118 - -0.4
Or see this region's nucleotide sequence