Strain Fitness in Erwinia amylovora T8 around OLJFJH_10625

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
2,199,714	-		OLJFJH_10620	0.57	+0.6
2,199,788	+		OLJFJH_10620	0.62	-3.2
2,199,805	-		OLJFJH_10620	0.63	+2.3
2,199,807	+		OLJFJH_10620	0.63	-0.5
2,199,807	+		OLJFJH_10620	0.63	+0.2
2,199,931	+		OLJFJH_10620	0.71	-1.2
2,199,931	+		OLJFJH_10620	0.71	-1.1
2,199,931	+		OLJFJH_10620	0.71	+0.7
2,199,932	-		OLJFJH_10620	0.71	-0.2
2,200,005	-		OLJFJH_10620	0.75	+0.4
2,200,210	+		OLJFJH_10620	0.88	-1.3
2,200,233	-		OLJFJH_10620	0.89	-0.2
2,200,337	+				-0.2
2,200,416	+				+1.0
2,200,416	+				-1.6
2,200,416	+				+2.3
2,200,417	-				+0.4
2,200,417	-				-0.0
2,200,417	-				-0.2
2,200,417	-				-1.6
2,200,418	+				-0.7
2,200,637	+		OLJFJH_10625	0.26	+6.8
2,200,637	+		OLJFJH_10625	0.26	-0.1
2,200,637	+		OLJFJH_10625	0.26	+1.1
2,200,638	-		OLJFJH_10625	0.26	+0.1
2,200,638	-		OLJFJH_10625	0.26	-0.2
2,200,638	-		OLJFJH_10625	0.26	+1.3
2,200,711	+		OLJFJH_10625	0.42	-1.3
2,200,712	-		OLJFJH_10625	0.42	+2.9
2,200,712	-		OLJFJH_10625	0.42	+0.4
2,200,765	-		OLJFJH_10625	0.53	-0.5
2,200,783	+		OLJFJH_10625	0.57	+0.5
2,200,816	-		OLJFJH_10625	0.64	+2.0
2,200,945	-				+0.4
2,200,960	-				-1.1
2,200,987	+				+0.4
2,200,988	-				+1.7
2,200,988	-				-0.8
2,200,988	-				-0.5
2,201,001	+				+1.0
2,201,001	+				+0.0
2,201,001	+				+1.0
2,201,038	-				-0.3
2,201,084	-				-1.0
2,201,084	-				+0.3
2,201,086	+				+0.1
2,201,087	-				+0.1
2,201,111	-				+0.4
2,201,138	-		OLJFJH_10630	0.15	+0.8
2,201,138	-		OLJFJH_10630	0.15	-0.6
2,201,184	+		OLJFJH_10630	0.23	-0.6
2,201,184	+		OLJFJH_10630	0.23	-0.2
2,201,185	-		OLJFJH_10630	0.23	+0.1
2,201,456	-		OLJFJH_10630	0.72	-1.1
2,201,456	-		OLJFJH_10630	0.72	-0.3
2,201,458	+		OLJFJH_10630	0.73	-0.2
2,201,464	+		OLJFJH_10630	0.74	+1.2
2,201,482	+		OLJFJH_10630	0.77	+0.8
2,201,482	+		OLJFJH_10630	0.77	+1.2
2,201,483	-		OLJFJH_10630	0.77	-0.3
2,201,483	-		OLJFJH_10630	0.77	+0.4
2,201,540	-		OLJFJH_10630	0.88	-1.9
2,201,586	+				-0.9
2,201,587	-				-0.6
2,201,587	-				-0.6
2,201,625	+				-1.1
2,201,646	+				-0.7
2,201,676	+				+0.5
2,201,676	+				-0.4
2,201,676	+				+2.1
2,201,676	+				-0.1
2,201,677	-				+0.0
2,201,677	-				-0.6
2,201,677	-				+0.6