Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_10060 and OLJFJH_10065 are separated by 12 nucleotides OLJFJH_10065 and OLJFJH_10070 are separated by 21 nucleotides OLJFJH_10070 and OLJFJH_10075 are separated by 64 nucleotides
OLJFJH_10060: OLJFJH_10060 - flagellar hook protein FlgE, at 2,073,050 to 2,074,282
_10060
OLJFJH_10065: OLJFJH_10065 - flagellar biosynthesis protein FlgF, at 2,074,295 to 2,075,032
_10065
OLJFJH_10070: OLJFJH_10070 - flagellar basal-body rod protein FlgG, at 2,075,054 to 2,075,836
_10070
OLJFJH_10075: OLJFJH_10075 - flagellar basal body L-ring protein FlgH, at 2,075,901 to 2,076,614
_10075
Position (kb)
2074
2075
2076 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2073.324 kb on - strand, within OLJFJH_10060 at 2073.326 kb on + strand, within OLJFJH_10060 at 2073.327 kb on - strand, within OLJFJH_10060 at 2073.327 kb on - strand, within OLJFJH_10060 at 2073.365 kb on + strand, within OLJFJH_10060 at 2073.365 kb on + strand, within OLJFJH_10060 at 2073.367 kb on + strand, within OLJFJH_10060 at 2073.367 kb on + strand, within OLJFJH_10060 at 2073.367 kb on + strand, within OLJFJH_10060 at 2073.367 kb on + strand, within OLJFJH_10060 at 2073.367 kb on + strand, within OLJFJH_10060 at 2073.368 kb on - strand, within OLJFJH_10060 at 2073.368 kb on - strand, within OLJFJH_10060 at 2073.368 kb on - strand, within OLJFJH_10060 at 2073.370 kb on + strand, within OLJFJH_10060 at 2073.371 kb on - strand, within OLJFJH_10060 at 2073.578 kb on - strand, within OLJFJH_10060 at 2073.644 kb on + strand, within OLJFJH_10060 at 2073.644 kb on + strand, within OLJFJH_10060 at 2073.644 kb on + strand, within OLJFJH_10060 at 2073.644 kb on + strand, within OLJFJH_10060 at 2073.645 kb on - strand, within OLJFJH_10060 at 2073.645 kb on - strand, within OLJFJH_10060 at 2073.645 kb on - strand, within OLJFJH_10060 at 2073.645 kb on - strand, within OLJFJH_10060 at 2073.647 kb on + strand, within OLJFJH_10060 at 2073.648 kb on - strand, within OLJFJH_10060 at 2073.935 kb on + strand, within OLJFJH_10060 at 2073.935 kb on + strand, within OLJFJH_10060 at 2073.936 kb on - strand, within OLJFJH_10060 at 2073.981 kb on - strand, within OLJFJH_10060 at 2074.193 kb on - strand at 2074.193 kb on - strand at 2074.193 kb on - strand at 2074.211 kb on - strand at 2074.214 kb on + strand at 2074.275 kb on + strand at 2074.276 kb on - strand at 2074.276 kb on - strand at 2074.276 kb on - strand at 2074.310 kb on + strand at 2074.310 kb on + strand at 2074.311 kb on - strand at 2074.311 kb on - strand at 2074.311 kb on - strand at 2074.311 kb on - strand at 2074.311 kb on - strand at 2074.363 kb on + strand at 2074.369 kb on + strand, within OLJFJH_10065 at 2074.496 kb on - strand, within OLJFJH_10065 at 2074.606 kb on + strand, within OLJFJH_10065 at 2074.607 kb on - strand, within OLJFJH_10065 at 2074.837 kb on + strand, within OLJFJH_10065 at 2074.960 kb on + strand at 2075.017 kb on - strand at 2075.017 kb on - strand at 2075.020 kb on - strand at 2075.020 kb on - strand at 2075.290 kb on + strand, within OLJFJH_10070 at 2075.290 kb on + strand, within OLJFJH_10070 at 2075.291 kb on - strand, within OLJFJH_10070 at 2075.393 kb on + strand, within OLJFJH_10070 at 2075.394 kb on - strand, within OLJFJH_10070 at 2075.396 kb on - strand, within OLJFJH_10070 at 2075.588 kb on - strand, within OLJFJH_10070 at 2075.705 kb on + strand, within OLJFJH_10070 at 2075.705 kb on + strand, within OLJFJH_10070 at 2075.706 kb on - strand, within OLJFJH_10070 at 2075.742 kb on + strand, within OLJFJH_10070 at 2075.743 kb on - strand, within OLJFJH_10070 at 2075.743 kb on - strand, within OLJFJH_10070 at 2075.743 kb on - strand, within OLJFJH_10070 at 2075.786 kb on - strand at 2075.814 kb on + strand at 2075.834 kb on + strand at 2075.834 kb on + strand at 2075.916 kb on - strand at 2075.988 kb on - strand, within OLJFJH_10075 at 2075.988 kb on - strand, within OLJFJH_10075
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 2,073,324 - OLJFJH_10060 0.22 +0.2 2,073,326 + OLJFJH_10060 0.22 +1.0 2,073,327 - OLJFJH_10060 0.22 -0.2 2,073,327 - OLJFJH_10060 0.22 +0.0 2,073,365 + OLJFJH_10060 0.26 +0.4 2,073,365 + OLJFJH_10060 0.26 -0.1 2,073,367 + OLJFJH_10060 0.26 -0.9 2,073,367 + OLJFJH_10060 0.26 -0.4 2,073,367 + OLJFJH_10060 0.26 -0.7 2,073,367 + OLJFJH_10060 0.26 +0.0 2,073,367 + OLJFJH_10060 0.26 +2.5 2,073,368 - OLJFJH_10060 0.26 +0.2 2,073,368 - OLJFJH_10060 0.26 +1.9 2,073,368 - OLJFJH_10060 0.26 +0.7 2,073,370 + OLJFJH_10060 0.26 -1.2 2,073,371 - OLJFJH_10060 0.26 +0.0 2,073,578 - OLJFJH_10060 0.43 +0.4 2,073,644 + OLJFJH_10060 0.48 -0.6 2,073,644 + OLJFJH_10060 0.48 -0.5 2,073,644 + OLJFJH_10060 0.48 +1.8 2,073,644 + OLJFJH_10060 0.48 -0.6 2,073,645 - OLJFJH_10060 0.48 -0.2 2,073,645 - OLJFJH_10060 0.48 +0.2 2,073,645 - OLJFJH_10060 0.48 +0.5 2,073,645 - OLJFJH_10060 0.48 +1.1 2,073,647 + OLJFJH_10060 0.48 +0.8 2,073,648 - OLJFJH_10060 0.48 -0.1 2,073,935 + OLJFJH_10060 0.72 -0.8 2,073,935 + OLJFJH_10060 0.72 -0.5 2,073,936 - OLJFJH_10060 0.72 -0.1 2,073,981 - OLJFJH_10060 0.76 -0.3 2,074,193 - +0.5 2,074,193 - -1.1 2,074,193 - -0.4 2,074,211 - +3.3 2,074,214 + -0.1 2,074,275 + +0.9 2,074,276 - +0.0 2,074,276 - +0.7 2,074,276 - -0.2 2,074,310 + +0.4 2,074,310 + -0.1 2,074,311 - -0.7 2,074,311 - -1.6 2,074,311 - +0.5 2,074,311 - +0.2 2,074,311 - -0.5 2,074,363 + -0.2 2,074,369 + OLJFJH_10065 0.10 -0.3 2,074,496 - OLJFJH_10065 0.27 -1.7 2,074,606 + OLJFJH_10065 0.42 +3.3 2,074,607 - OLJFJH_10065 0.42 +1.0 2,074,837 + OLJFJH_10065 0.73 -0.4 2,074,960 + -0.0 2,075,017 - -0.0 2,075,017 - -0.2 2,075,020 - -2.2 2,075,020 - -0.7 2,075,290 + OLJFJH_10070 0.30 +0.8 2,075,290 + OLJFJH_10070 0.30 +3.9 2,075,291 - OLJFJH_10070 0.30 -0.2 2,075,393 + OLJFJH_10070 0.43 +1.5 2,075,394 - OLJFJH_10070 0.43 -0.2 2,075,396 - OLJFJH_10070 0.44 +0.7 2,075,588 - OLJFJH_10070 0.68 -0.3 2,075,705 + OLJFJH_10070 0.83 -0.8 2,075,705 + OLJFJH_10070 0.83 +0.3 2,075,706 - OLJFJH_10070 0.83 +1.8 2,075,742 + OLJFJH_10070 0.88 +1.4 2,075,743 - OLJFJH_10070 0.88 -1.3 2,075,743 - OLJFJH_10070 0.88 -2.8 2,075,743 - OLJFJH_10070 0.88 -0.0 2,075,786 - +0.4 2,075,814 + -1.0 2,075,834 + +0.6 2,075,834 + -0.3 2,075,916 - -0.4 2,075,988 - OLJFJH_10075 0.12 +0.2 2,075,988 - OLJFJH_10075 0.12 +3.4
Or see this region's nucleotide sequence