Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_09665 and OLJFJH_09670 are separated by 56 nucleotides OLJFJH_09670 and OLJFJH_09675 are separated by 277 nucleotides OLJFJH_09675 and OLJFJH_09680 are separated by 310 nucleotides
OLJFJH_09665: OLJFJH_09665 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 1,994,463 to 1,995,254
_09665
OLJFJH_09670: OLJFJH_09670 - 50S ribosomal protein L19, at 1,995,311 to 1,995,658
_09670
OLJFJH_09675: OLJFJH_09675 - hypothetical protein, at 1,995,936 to 1,996,193
_09675
OLJFJH_09680: OLJFJH_09680 - hypothetical protein, at 1,996,504 to 1,997,250
_09680
Position (kb)
1995
1996
1997 Strain fitness (log2 ratio)
-1
0
1
2 at 1995.736 kb on - strand at 1995.852 kb on + strand at 1996.120 kb on - strand, within OLJFJH_09675 at 1996.183 kb on - strand at 1996.341 kb on - strand at 1996.407 kb on + strand at 1996.447 kb on - strand at 1996.462 kb on + strand at 1996.468 kb on - strand at 1996.568 kb on + strand at 1996.628 kb on + strand, within OLJFJH_09680 at 1996.798 kb on - strand, within OLJFJH_09680 at 1996.845 kb on - strand, within OLJFJH_09680 at 1996.978 kb on + strand, within OLJFJH_09680 at 1996.980 kb on + strand, within OLJFJH_09680 at 1996.981 kb on - strand, within OLJFJH_09680 at 1997.184 kb on + strand at 1997.184 kb on + strand at 1997.185 kb on - strand at 1997.188 kb on + strand at 1997.188 kb on + strand at 1997.188 kb on + strand at 1997.193 kb on + strand at 1997.193 kb on + strand at 1997.193 kb on + strand at 1997.193 kb on + strand at 1997.193 kb on + strand at 1997.193 kb on + strand at 1997.193 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 1,995,736 - +1.2 1,995,852 + -0.7 1,996,120 - OLJFJH_09675 0.71 +1.0 1,996,183 - -0.8 1,996,341 - +0.6 1,996,407 + +1.6 1,996,447 - +0.2 1,996,462 + +1.1 1,996,468 - -0.8 1,996,568 + +2.3 1,996,628 + OLJFJH_09680 0.17 -0.3 1,996,798 - OLJFJH_09680 0.39 +0.5 1,996,845 - OLJFJH_09680 0.46 -0.9 1,996,978 + OLJFJH_09680 0.63 +0.4 1,996,980 + OLJFJH_09680 0.64 -0.2 1,996,981 - OLJFJH_09680 0.64 -1.2 1,997,184 + +1.0 1,997,184 + -0.1 1,997,185 - +0.8 1,997,188 + -0.8 1,997,188 + +0.2 1,997,188 + -1.0 1,997,193 + +0.8 1,997,193 + +0.3 1,997,193 + -0.0 1,997,193 + -0.4 1,997,193 + +0.4 1,997,193 + +1.3 1,997,193 + -0.2
Or see this region's nucleotide sequence