Strain Fitness in Erwinia amylovora T8 around OLJFJH_08355
Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 |
|---|---|---|---|---|---|
| remove | |||||
| 1,720,755 | + | -1.5 | |||
| 1,720,871 | + | +0.3 | |||
| 1,720,901 | - | -0.6 | |||
| 1,721,160 | - | +0.4 | |||
| 1,721,241 | - | OLJFJH_08355 | 0.33 | +0.2 | |
| 1,721,241 | - | OLJFJH_08355 | 0.33 | +2.0 | |
| 1,721,535 | - | -0.7 | |||
| 1,721,538 | + | -2.4 | |||
| 1,721,658 | - | -0.6 | |||
| 1,721,821 | + | OLJFJH_08360 | 0.25 | -1.6 | |
| 1,721,972 | + | OLJFJH_08360 | 0.54 | +0.1 | |
| 1,721,973 | - | OLJFJH_08360 | 0.54 | +0.5 | |
| 1,722,068 | - | OLJFJH_08360 | 0.72 | -0.7 | |
| 1,722,130 | + | OLJFJH_08360 | 0.84 | +0.1 | |
| 1,722,131 | - | OLJFJH_08360 | 0.84 | -0.7 | |
| 1,722,282 | + | OLJFJH_08365 | 0.35 | -0.6 | |
| 1,722,306 | - | OLJFJH_08365 | 0.44 | +0.7 |
Or see this region's nucleotide sequence