Strain Fitness in Erwinia amylovora T8 around OLJFJH_06975

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
1,419,783	+		OLJFJH_06965	0.60	+0.4
1,419,783	+		OLJFJH_06965	0.60	+0.1
1,419,783	+		OLJFJH_06965	0.60	+0.7
1,419,904	+				+0.2
1,419,905	-				-0.2
1,419,908	+				-0.6
1,419,923	+				-0.9
1,419,947	-				-0.4
1,419,948	+				-0.2
1,419,965	+				-0.8
1,419,986	+				-1.3
1,420,004	-				+0.4
1,420,004	-				-0.4
1,420,262	-				+0.4
1,420,328	+				+0.2
1,420,337	-				+1.6
1,420,404	+				-0.3
1,420,419	-				+0.5
1,420,547	-				-0.1
1,420,550	-				-0.5
1,420,579	+				-0.9
1,420,579	+				+0.4
1,420,762	+				-0.4
1,420,836	-		OLJFJH_06975	0.16	-2.3
1,421,003	+		OLJFJH_06975	0.51	-0.4
1,421,003	+		OLJFJH_06975	0.51	-0.7
1,421,004	-		OLJFJH_06975	0.52	-1.0
1,421,004	-		OLJFJH_06975	0.52	+0.1
1,421,004	-		OLJFJH_06975	0.52	-1.3
1,421,008	-		OLJFJH_06975	0.52	-2.1
1,421,088	-		OLJFJH_06975	0.69	-0.4
1,421,088	-		OLJFJH_06975	0.69	+1.0
1,421,198	+				-1.6
1,421,231	+				+0.4
1,421,231	+				-2.5
1,421,232	-				-2.3
1,421,232	-				-0.1
1,421,433	-				+0.8
1,421,434	+				-0.6
1,421,434	+				+1.0
1,421,434	+				+2.4
1,421,461	+				-0.0
1,421,469	+				+0.5
1,421,469	+				+1.0
1,421,469	+				+0.6
1,421,469	+				+0.3
1,421,470	-				+0.1
1,421,502	+				-0.5
1,421,581	+				-0.5
1,421,582	-				+4.3
1,421,659	-				+0.6
1,421,659	-				+0.3
1,421,661	-				-0.4
1,421,670	+				+0.3
1,421,671	-				+2.6
1,421,673	-				-0.3
1,421,673	-				+1.1
1,421,813	-		OLJFJH_06980	0.15	+0.3
1,421,918	+		OLJFJH_06980	0.26	+1.2
1,422,020	+		OLJFJH_06980	0.37	-0.3
1,422,098	+		OLJFJH_06980	0.45	-0.0
1,422,140	+		OLJFJH_06980	0.50	+2.8
1,422,140	+		OLJFJH_06980	0.50	-1.3
1,422,141	-		OLJFJH_06980	0.50	+0.3
1,422,166	+		OLJFJH_06980	0.52	+0.2