Strain Fitness in Erwinia amylovora T8 around OLJFJH_05980

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
1,203,608	+		OLJFJH_05970	0.47	-1.3
1,203,609	-		OLJFJH_05970	0.48	+3.2
1,203,699	-		OLJFJH_05970	0.56	-0.3
1,203,699	-		OLJFJH_05970	0.56	+0.1
1,203,764	+		OLJFJH_05970	0.63	+1.7
1,203,769	-		OLJFJH_05970	0.63	+0.2
1,203,769	-		OLJFJH_05970	0.63	+0.1
1,203,769	-		OLJFJH_05970	0.63	-0.5
1,203,786	-		OLJFJH_05970	0.65	+0.4
1,204,008	-		OLJFJH_05970	0.87	+0.1
1,204,058	+				+0.1
1,204,061	+				-0.6
1,204,062	-				+1.7
1,204,188	+				+2.4
1,204,188	+				+0.6
1,204,191	-				-1.0
1,204,212	-				-0.1
1,204,238	+				+0.8
1,204,296	+				+0.1
1,204,296	+				+1.4
1,204,296	+				+0.9
1,204,314	+				-0.2
1,204,323	+				-0.4
1,204,324	-				-0.2
1,204,328	-				-2.1
1,204,328	-				-0.3
1,204,328	-				-1.1
1,204,356	+		OLJFJH_05975	0.11	-0.7
1,204,357	-		OLJFJH_05975	0.12	+1.3
1,204,398	+		OLJFJH_05975	0.28	+4.6
1,204,535	-		OLJFJH_05975	0.82	+0.2
1,204,571	+				-0.7
1,204,571	+				+0.3
1,204,571	+				-0.6
1,204,571	+				-1.5
1,204,571	+				-0.7
1,204,571	+				-0.4
1,204,572	-				-1.0
1,204,572	-				-0.6
1,204,572	-				+0.4
1,204,572	-				-0.6
1,204,572	-				-0.2
1,204,572	-				+1.5
1,204,573	+				-2.0
1,204,637	+				+3.1
1,204,638	-				-0.7
1,204,642	-				-0.6
1,204,692	-		OLJFJH_05980	0.14	+0.7
1,204,721	+		OLJFJH_05980	0.18	+4.4
1,204,837	+		OLJFJH_05980	0.31	+0.9
1,204,838	-		OLJFJH_05980	0.31	+0.9
1,205,212	-		OLJFJH_05980	0.75	-1.5
1,205,227	-		OLJFJH_05980	0.77	+1.1
1,205,343	+				+0.9
1,205,343	+				-0.2
1,205,347	-				+0.6
1,205,400	+				+0.1
1,205,410	+				+0.8
1,205,421	+				+0.4
1,205,421	+				-0.4
1,205,462	-				-0.4
1,205,472	-				+0.1
1,205,474	+				-0.2
1,205,477	+				+0.1
1,205,477	+				-0.3
1,205,478	-				-0.1
1,205,484	+				+0.7
1,205,484	+				+0.2
1,205,485	-				+0.5
1,205,485	-				-0.4
1,205,508	+				+0.0
1,205,508	+				+0.1
1,205,509	-				-2.0
1,205,514	+				-0.9
1,205,514	+				+1.0
1,205,514	+				+0.6
1,205,515	-				+2.8
1,205,515	-				+0.1
1,205,515	-				-1.6
1,205,588	+				-1.0
1,205,588	+				+0.2
1,205,590	+				+0.3
1,205,590	+				+0.9
1,205,590	+				-0.3
1,205,591	-				-0.4
1,205,636	+				-0.7
1,205,637	-				-0.2
1,205,637	-				+0.1
1,205,637	-				-1.1
1,205,674	+				-0.8
1,205,676	+				+0.6
1,205,676	+				+1.3
1,205,676	+				+2.8
1,205,676	+				-2.3
1,205,677	-				-0.0
1,205,677	-				+0.5
1,205,822	+		OLJFJH_05985	0.33	-0.2
1,205,822	+		OLJFJH_05985	0.33	+1.2
1,205,823	-		OLJFJH_05985	0.34	-0.5
1,205,841	+		OLJFJH_05985	0.44	-0.6
1,205,842	-		OLJFJH_05985	0.45	+0.6
1,205,887	+		OLJFJH_05985	0.70	-1.0
1,205,887	+		OLJFJH_05985	0.70	-0.8
1,205,887	+		OLJFJH_05985	0.70	+0.9
1,205,887	+		OLJFJH_05985	0.70	+1.8
1,205,888	-		OLJFJH_05985	0.71	-0.4
1,205,888	-		OLJFJH_05985	0.71	+0.4
1,205,980	-		OLJFJH_05990	0.27	-0.6
1,206,033	-				-1.4
1,206,099	-				-0.1
1,206,276	+		OLJFJH_05995	0.16	-2.0
1,206,330	+		OLJFJH_05995	0.19	-0.2
1,206,331	-		OLJFJH_05995	0.19	+1.1
1,206,331	-		OLJFJH_05995	0.19	-1.1