Strain Fitness in Erwinia amylovora T8 around OLJFJH_05055

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
1,003,249	+		OLJFJH_05050	0.45	+0.1
1,003,250	-		OLJFJH_05050	0.45	-1.4
1,003,461	+		OLJFJH_05050	0.70	-0.8
1,003,473	-		OLJFJH_05050	0.71	-0.0
1,003,473	-		OLJFJH_05050	0.71	+2.7
1,003,494	+		OLJFJH_05050	0.74	+0.2
1,003,580	+		OLJFJH_05050	0.84	+0.0
1,003,580	+		OLJFJH_05050	0.84	-1.8
1,003,580	+		OLJFJH_05050	0.84	-1.0
1,003,581	-		OLJFJH_05050	0.84	-0.4
1,003,772	-				+1.6
1,003,841	+				+0.3
1,003,841	+				+0.1
1,003,858	+				-0.7
1,003,859	-				+2.6
1,003,952	+				-1.7
1,003,952	+				+0.3
1,003,954	+				+3.1
1,003,954	+				+0.6
1,003,954	+				-2.3
1,003,955	-				-0.5
1,003,955	-				+1.8
1,003,987	-				-0.6
1,004,007	+				-1.0
1,004,007	+				-1.4
1,004,079	+				+1.6
1,004,079	+				-0.6
1,004,080	-				+0.2
1,004,081	+				-0.2
1,004,081	+				-1.2
1,004,203	+		OLJFJH_05055	0.11	-0.4
1,004,260	+		OLJFJH_05055	0.17	+2.2
1,004,309	-		OLJFJH_05055	0.23	-0.8
1,004,309	-		OLJFJH_05055	0.23	-0.3
1,004,559	-		OLJFJH_05055	0.50	+1.9
1,004,559	-		OLJFJH_05055	0.50	-0.7
1,004,568	+		OLJFJH_05055	0.51	+1.0
1,004,568	+		OLJFJH_05055	0.51	-0.2
1,004,568	+		OLJFJH_05055	0.51	-0.5
1,004,728	+		OLJFJH_05055	0.69	+0.4
1,004,782	-		OLJFJH_05055	0.75	-0.4
1,004,865	+		OLJFJH_05055	0.84	+1.9
1,004,996	+				+0.0
1,005,029	+				-0.3
1,005,033	+				+0.9
1,005,034	-				+0.5
1,005,034	-				-0.1
1,005,034	-				+0.7
1,005,045	+				-0.4
1,005,045	+				-1.1
1,005,045	+				-0.4
1,005,046	-				-0.3
1,005,046	-				+0.6
1,005,141	+		OLJFJH_05060	0.21	+0.4
1,005,141	+		OLJFJH_05060	0.21	-1.5
1,005,141	+		OLJFJH_05060	0.21	-0.1
1,005,141	+		OLJFJH_05060	0.21	-0.5
1,005,197	+		OLJFJH_05060	0.30	-0.7
1,005,313	+		OLJFJH_05060	0.49	-0.0
1,005,314	-		OLJFJH_05060	0.49	+1.0
1,005,314	-		OLJFJH_05060	0.49	+0.9
1,005,633	-				-1.4
1,005,633	-				+0.2
1,005,695	+				+0.4
1,005,696	-				-0.4
1,005,696	-				-0.7
1,005,696	-				-0.4
1,005,696	-				-1.6
1,005,705	-				-0.8
1,005,705	-				-1.8
1,005,750	+		OLJFJH_05065	0.16	+1.7
1,005,750	+		OLJFJH_05065	0.16	+0.5
1,005,808	-		OLJFJH_05065	0.26	-1.6
1,005,824	+		OLJFJH_05065	0.29	-1.0
1,005,943	+		OLJFJH_05065	0.50	-0.8
1,005,944	-		OLJFJH_05065	0.51	+0.2
1,006,003	+		OLJFJH_05065	0.61	+0.9
1,006,004	-		OLJFJH_05065	0.61	+1.1