Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04710 and OLJFJH_04715 are separated by 176 nucleotides OLJFJH_04715 and OLJFJH_04720 are separated by 123 nucleotides
OLJFJH_04710: OLJFJH_04710 - nucleoside hydrolase, at 920,719 to 921,630
_04710
OLJFJH_04715: OLJFJH_04715 - DUF1471 domain-containing protein, at 921,807 to 922,028
_04715
OLJFJH_04720: OLJFJH_04720 - peptidase, at 922,152 to 923,540
_04720
Position (kb) 921
922
923 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 920.811 kb on + strand, within OLJFJH_04710 at 920.816 kb on + strand, within OLJFJH_04710 at 920.888 kb on + strand, within OLJFJH_04710 at 920.896 kb on + strand, within OLJFJH_04710 at 921.042 kb on + strand, within OLJFJH_04710 at 921.189 kb on + strand, within OLJFJH_04710 at 921.189 kb on + strand, within OLJFJH_04710 at 921.189 kb on + strand, within OLJFJH_04710 at 921.190 kb on - strand, within OLJFJH_04710 at 921.321 kb on - strand, within OLJFJH_04710 at 921.364 kb on + strand, within OLJFJH_04710 at 921.364 kb on + strand, within OLJFJH_04710 at 921.374 kb on - strand, within OLJFJH_04710 at 921.374 kb on - strand, within OLJFJH_04710 at 921.374 kb on - strand, within OLJFJH_04710 at 921.375 kb on + strand, within OLJFJH_04710 at 921.375 kb on + strand, within OLJFJH_04710 at 921.375 kb on + strand, within OLJFJH_04710 at 921.375 kb on + strand, within OLJFJH_04710 at 921.376 kb on - strand, within OLJFJH_04710 at 921.376 kb on - strand, within OLJFJH_04710 at 921.557 kb on + strand at 921.749 kb on + strand at 921.749 kb on + strand at 921.749 kb on + strand at 921.750 kb on - strand at 921.758 kb on - strand at 921.758 kb on - strand at 921.776 kb on + strand at 921.776 kb on + strand at 921.776 kb on + strand at 921.777 kb on - strand at 921.777 kb on - strand at 921.954 kb on + strand, within OLJFJH_04715 at 921.955 kb on - strand, within OLJFJH_04715 at 921.957 kb on - strand, within OLJFJH_04715 at 921.993 kb on - strand, within OLJFJH_04715 at 922.258 kb on + strand at 922.259 kb on - strand at 922.259 kb on - strand at 922.259 kb on - strand at 922.259 kb on - strand at 922.264 kb on + strand at 922.265 kb on - strand at 922.265 kb on - strand at 922.297 kb on + strand, within OLJFJH_04720 at 922.485 kb on - strand, within OLJFJH_04720 at 922.578 kb on + strand, within OLJFJH_04720 at 922.579 kb on - strand, within OLJFJH_04720 at 922.989 kb on - strand, within OLJFJH_04720 at 922.989 kb on - strand, within OLJFJH_04720 at 923.021 kb on + strand, within OLJFJH_04720 at 923.022 kb on - strand, within OLJFJH_04720 at 923.022 kb on - strand, within OLJFJH_04720 at 923.023 kb on + strand, within OLJFJH_04720 at 923.024 kb on - strand, within OLJFJH_04720 at 923.024 kb on - strand, within OLJFJH_04720
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 920,811 + OLJFJH_04710 0.10 -1.7 920,816 + OLJFJH_04710 0.11 -0.5 920,888 + OLJFJH_04710 0.19 +0.1 920,896 + OLJFJH_04710 0.19 +0.1 921,042 + OLJFJH_04710 0.35 -0.2 921,189 + OLJFJH_04710 0.52 +0.2 921,189 + OLJFJH_04710 0.52 -0.4 921,189 + OLJFJH_04710 0.52 +0.0 921,190 - OLJFJH_04710 0.52 +0.0 921,321 - OLJFJH_04710 0.66 +0.7 921,364 + OLJFJH_04710 0.71 -0.2 921,364 + OLJFJH_04710 0.71 -0.1 921,374 - OLJFJH_04710 0.72 -0.9 921,374 - OLJFJH_04710 0.72 +2.2 921,374 - OLJFJH_04710 0.72 +0.1 921,375 + OLJFJH_04710 0.72 -0.1 921,375 + OLJFJH_04710 0.72 -1.1 921,375 + OLJFJH_04710 0.72 -0.5 921,375 + OLJFJH_04710 0.72 +0.0 921,376 - OLJFJH_04710 0.72 +1.1 921,376 - OLJFJH_04710 0.72 -3.0 921,557 + -0.4 921,749 + -0.2 921,749 + -0.2 921,749 + -0.2 921,750 - +0.2 921,758 - -1.4 921,758 - +0.1 921,776 + -0.6 921,776 + -1.0 921,776 + -0.2 921,777 - +1.2 921,777 - -0.5 921,954 + OLJFJH_04715 0.66 +1.2 921,955 - OLJFJH_04715 0.67 -1.4 921,957 - OLJFJH_04715 0.68 +2.4 921,993 - OLJFJH_04715 0.84 +0.4 922,258 + +0.0 922,259 - +7.7 922,259 - -0.4 922,259 - -1.2 922,259 - -0.6 922,264 + -0.8 922,265 - -0.2 922,265 - +0.4 922,297 + OLJFJH_04720 0.10 -1.5 922,485 - OLJFJH_04720 0.24 -0.1 922,578 + OLJFJH_04720 0.31 +0.0 922,579 - OLJFJH_04720 0.31 +1.8 922,989 - OLJFJH_04720 0.60 +0.1 922,989 - OLJFJH_04720 0.60 -0.3 923,021 + OLJFJH_04720 0.63 +0.1 923,022 - OLJFJH_04720 0.63 +0.0 923,022 - OLJFJH_04720 0.63 +2.0 923,023 + OLJFJH_04720 0.63 -1.2 923,024 - OLJFJH_04720 0.63 +0.7 923,024 - OLJFJH_04720 0.63 +0.5
Or see this region's nucleotide sequence