Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04615 and OLJFJH_04620 are separated by 111 nucleotides OLJFJH_04620 and OLJFJH_04625 overlap by 4 nucleotides OLJFJH_04625 and OLJFJH_04630 are separated by 60 nucleotides OLJFJH_04630 and OLJFJH_04635 are separated by 121 nucleotides
OLJFJH_04615: OLJFJH_04615 - hypothetical protein, at 900,013 to 900,225
_04615
OLJFJH_04620: OLJFJH_04620 - Inversin, at 900,337 to 901,077
_04620
OLJFJH_04625: OLJFJH_04625 - hypothetical protein, at 901,074 to 901,310
_04625
OLJFJH_04630: OLJFJH_04630 - phospholipase, at 901,371 to 902,147
_04630
OLJFJH_04635: OLJFJH_04635 - hypothetical protein, at 902,269 to 902,592
_04635
Position (kb) 901
902 Strain fitness (log2 ratio) -2
-1
0
1
2 at 900.129 kb on - strand, within OLJFJH_04615 at 900.131 kb on - strand, within OLJFJH_04615 at 900.203 kb on + strand, within OLJFJH_04615 at 900.204 kb on - strand at 900.212 kb on + strand at 900.925 kb on + strand, within OLJFJH_04620 at 901.125 kb on - strand, within OLJFJH_04625 at 901.125 kb on - strand, within OLJFJH_04625 at 901.161 kb on + strand, within OLJFJH_04625 at 901.484 kb on + strand, within OLJFJH_04630 at 901.575 kb on - strand, within OLJFJH_04630 at 901.690 kb on - strand, within OLJFJH_04630 at 901.690 kb on - strand, within OLJFJH_04630 at 901.698 kb on - strand, within OLJFJH_04630 at 901.904 kb on + strand, within OLJFJH_04630 at 901.904 kb on + strand, within OLJFJH_04630 at 901.938 kb on - strand, within OLJFJH_04630 at 902.012 kb on - strand, within OLJFJH_04630 at 902.090 kb on + strand at 902.090 kb on + strand at 902.090 kb on + strand at 902.091 kb on - strand at 902.095 kb on - strand at 902.106 kb on + strand at 902.107 kb on - strand at 902.233 kb on + strand at 902.234 kb on - strand at 902.273 kb on + strand at 902.276 kb on - strand at 902.276 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 900,129 - OLJFJH_04615 0.54 +0.5 900,131 - OLJFJH_04615 0.55 +0.2 900,203 + OLJFJH_04615 0.89 -0.5 900,204 - -0.1 900,212 + -0.6 900,925 + OLJFJH_04620 0.79 +2.6 901,125 - OLJFJH_04625 0.22 +1.8 901,125 - OLJFJH_04625 0.22 +0.5 901,161 + OLJFJH_04625 0.37 -0.6 901,484 + OLJFJH_04630 0.15 +1.3 901,575 - OLJFJH_04630 0.26 +1.3 901,690 - OLJFJH_04630 0.41 -1.3 901,690 - OLJFJH_04630 0.41 -0.1 901,698 - OLJFJH_04630 0.42 +1.5 901,904 + OLJFJH_04630 0.69 +0.0 901,904 + OLJFJH_04630 0.69 -0.2 901,938 - OLJFJH_04630 0.73 +0.9 902,012 - OLJFJH_04630 0.82 -1.8 902,090 + +0.0 902,090 + -0.3 902,090 + +1.7 902,091 - -0.4 902,095 - +0.7 902,106 + -0.5 902,107 - -0.6 902,233 + -0.5 902,234 - +0.5 902,273 + +2.0 902,276 - +0.8 902,276 - -0.3
Or see this region's nucleotide sequence