Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03045 and OLJFJH_03050 are separated by 44 nucleotides OLJFJH_03050 and OLJFJH_03055 are separated by 76 nucleotides OLJFJH_03055 and OLJFJH_03060 overlap by 49 nucleotides OLJFJH_03060 and OLJFJH_03065 overlap by 1 nucleotides
OLJFJH_03045: OLJFJH_03045 - hypothetical protein, at 551,396 to 552,139
_03045
OLJFJH_03050: OLJFJH_03050 - hypothetical protein, at 552,184 to 552,726
_03050
OLJFJH_03055: OLJFJH_03055 - hypothetical protein, at 552,803 to 553,555
_03055
OLJFJH_03060: OLJFJH_03060 - hypothetical protein, at 553,507 to 554,121
_03060
OLJFJH_03065: OLJFJH_03065 - DUF4123 domain-containing protein, at 554,121 to 554,675
_03065
Position (kb) 552
553
554 Strain fitness (log2 ratio) -2
-1
0
1
2 at 552.727 kb on - strand at 552.892 kb on + strand, within OLJFJH_03055 at 553.110 kb on + strand, within OLJFJH_03055 at 553.298 kb on + strand, within OLJFJH_03055 at 553.500 kb on + strand at 553.715 kb on - strand, within OLJFJH_03060 at 553.721 kb on - strand, within OLJFJH_03060 at 553.722 kb on + strand, within OLJFJH_03060 at 553.723 kb on - strand, within OLJFJH_03060 at 553.730 kb on + strand, within OLJFJH_03060 at 553.811 kb on - strand, within OLJFJH_03060 at 553.811 kb on - strand, within OLJFJH_03060 at 553.941 kb on + strand, within OLJFJH_03060 at 553.975 kb on + strand, within OLJFJH_03060 at 553.978 kb on - strand, within OLJFJH_03060 at 554.159 kb on + strand at 554.237 kb on - strand, within OLJFJH_03065 at 554.464 kb on - strand, within OLJFJH_03065 at 554.511 kb on - strand, within OLJFJH_03065 at 554.511 kb on - strand, within OLJFJH_03065
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 552,727 - -0.4 552,892 + OLJFJH_03055 0.12 -1.1 553,110 + OLJFJH_03055 0.41 -0.3 553,298 + OLJFJH_03055 0.66 -1.9 553,500 + -0.9 553,715 - OLJFJH_03060 0.34 +0.7 553,721 - OLJFJH_03060 0.35 -0.9 553,722 + OLJFJH_03060 0.35 +1.4 553,723 - OLJFJH_03060 0.35 -2.2 553,730 + OLJFJH_03060 0.36 -0.7 553,811 - OLJFJH_03060 0.49 +1.3 553,811 - OLJFJH_03060 0.49 -0.8 553,941 + OLJFJH_03060 0.71 -0.3 553,975 + OLJFJH_03060 0.76 +0.3 553,978 - OLJFJH_03060 0.77 +1.5 554,159 + +0.1 554,237 - OLJFJH_03065 0.21 -0.1 554,464 - OLJFJH_03065 0.62 -0.4 554,511 - OLJFJH_03065 0.70 +1.9 554,511 - OLJFJH_03065 0.70 +0.3
Or see this region's nucleotide sequence