Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02945 and OLJFJH_02950 are separated by 378 nucleotides OLJFJH_02950 and OLJFJH_02955 are separated by 241 nucleotides
OLJFJH_02945: OLJFJH_02945 - putative arabinose efflux permease AraJ MFS family, at 530,172 to 531,428
_02945
OLJFJH_02950: OLJFJH_02950 - cupin domain-containing protein, at 531,807 to 532,211
_02950
OLJFJH_02955: OLJFJH_02955 - asparagine synthase (glutamine-hydrolyzing), at 532,453 to 534,042
_02955
Position (kb) 531
532
533 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 530.867 kb on - strand, within OLJFJH_02945 at 530.918 kb on + strand, within OLJFJH_02945 at 530.952 kb on - strand, within OLJFJH_02945 at 531.009 kb on + strand, within OLJFJH_02945 at 531.010 kb on - strand, within OLJFJH_02945 at 531.021 kb on - strand, within OLJFJH_02945 at 531.059 kb on + strand, within OLJFJH_02945 at 531.098 kb on + strand, within OLJFJH_02945 at 531.111 kb on + strand, within OLJFJH_02945 at 531.211 kb on - strand, within OLJFJH_02945 at 531.211 kb on - strand, within OLJFJH_02945 at 531.224 kb on + strand, within OLJFJH_02945 at 531.318 kb on + strand at 531.318 kb on + strand at 531.404 kb on + strand at 531.404 kb on + strand at 531.404 kb on + strand at 531.405 kb on - strand at 531.463 kb on + strand at 531.504 kb on + strand at 531.505 kb on - strand at 531.568 kb on + strand at 531.655 kb on + strand at 531.656 kb on - strand at 531.656 kb on - strand at 531.656 kb on - strand at 531.806 kb on + strand at 531.812 kb on + strand at 531.812 kb on + strand at 531.812 kb on + strand at 531.813 kb on - strand at 531.860 kb on - strand, within OLJFJH_02950 at 531.932 kb on - strand, within OLJFJH_02950 at 531.955 kb on + strand, within OLJFJH_02950 at 531.955 kb on + strand, within OLJFJH_02950 at 532.132 kb on + strand, within OLJFJH_02950 at 532.190 kb on - strand at 532.301 kb on - strand at 532.438 kb on - strand at 532.496 kb on - strand at 532.811 kb on - strand, within OLJFJH_02955 at 532.874 kb on + strand, within OLJFJH_02955 at 532.886 kb on - strand, within OLJFJH_02955 at 533.016 kb on + strand, within OLJFJH_02955 at 533.145 kb on + strand, within OLJFJH_02955 at 533.146 kb on - strand, within OLJFJH_02955 at 533.150 kb on + strand, within OLJFJH_02955 at 533.151 kb on - strand, within OLJFJH_02955
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 530,867 - OLJFJH_02945 0.55 +0.4 530,918 + OLJFJH_02945 0.59 +2.4 530,952 - OLJFJH_02945 0.62 -0.5 531,009 + OLJFJH_02945 0.67 +0.0 531,010 - OLJFJH_02945 0.67 -0.3 531,021 - OLJFJH_02945 0.68 +0.9 531,059 + OLJFJH_02945 0.71 +0.5 531,098 + OLJFJH_02945 0.74 -1.9 531,111 + OLJFJH_02945 0.75 -1.8 531,211 - OLJFJH_02945 0.83 -0.5 531,211 - OLJFJH_02945 0.83 -0.7 531,224 + OLJFJH_02945 0.84 +3.3 531,318 + +0.4 531,318 + -0.7 531,404 + -1.4 531,404 + -0.1 531,404 + +2.4 531,405 - -1.6 531,463 + -0.1 531,504 + -0.7 531,505 - -0.3 531,568 + +0.4 531,655 + -0.8 531,656 - -0.6 531,656 - -1.3 531,656 - -0.9 531,806 + -0.5 531,812 + +0.5 531,812 + -0.3 531,812 + -2.3 531,813 - +1.0 531,860 - OLJFJH_02950 0.13 +1.2 531,932 - OLJFJH_02950 0.31 +0.1 531,955 + OLJFJH_02950 0.37 +1.8 531,955 + OLJFJH_02950 0.37 -0.5 532,132 + OLJFJH_02950 0.80 +1.1 532,190 - +0.1 532,301 - -3.4 532,438 - -0.9 532,496 - +1.2 532,811 - OLJFJH_02955 0.23 +0.7 532,874 + OLJFJH_02955 0.26 -0.4 532,886 - OLJFJH_02955 0.27 -0.3 533,016 + OLJFJH_02955 0.35 -0.5 533,145 + OLJFJH_02955 0.44 +1.0 533,146 - OLJFJH_02955 0.44 -0.5 533,150 + OLJFJH_02955 0.44 +0.5 533,151 - OLJFJH_02955 0.44 -0.6
Or see this region's nucleotide sequence