Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_00690 and OLJFJH_00695 overlap by 1 nucleotides OLJFJH_00695 and OLJFJH_00700 are separated by 14 nucleotides OLJFJH_00700 and OLJFJH_00705 are separated by 48 nucleotides
OLJFJH_00690: OLJFJH_00690 - Fe(3+)-hydroxamate ABC transporter permease FhuB, at 51,771 to 53,747
_00690
OLJFJH_00695: OLJFJH_00695 - Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD, at 53,747 to 54,625
_00695
OLJFJH_00700: OLJFJH_00700 - Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC, at 54,640 to 55,434
_00700
OLJFJH_00705: OLJFJH_00705 - ferrichrome porin FhuA, at 55,483 to 57,699
_00705
Position (kb) 54
55
56 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 53.936 kb on + strand, within OLJFJH_00695 at 53.937 kb on - strand, within OLJFJH_00695 at 54.251 kb on - strand, within OLJFJH_00695 at 54.293 kb on - strand, within OLJFJH_00695 at 54.445 kb on - strand, within OLJFJH_00695 at 54.450 kb on + strand, within OLJFJH_00695 at 54.450 kb on + strand, within OLJFJH_00695 at 54.451 kb on - strand, within OLJFJH_00695 at 54.451 kb on - strand, within OLJFJH_00695 at 54.451 kb on - strand, within OLJFJH_00695 at 54.547 kb on - strand at 54.631 kb on + strand at 54.645 kb on - strand at 54.704 kb on + strand at 54.704 kb on + strand at 54.704 kb on + strand at 54.704 kb on + strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.707 kb on - strand at 54.707 kb on - strand at 55.173 kb on - strand, within OLJFJH_00700 at 55.173 kb on - strand, within OLJFJH_00700 at 55.173 kb on - strand, within OLJFJH_00700 at 55.303 kb on - strand, within OLJFJH_00700 at 55.303 kb on - strand, within OLJFJH_00700 at 55.357 kb on + strand at 55.565 kb on + strand at 55.594 kb on - strand at 55.662 kb on + strand at 55.662 kb on + strand at 55.662 kb on + strand at 55.662 kb on + strand at 55.663 kb on - strand at 55.710 kb on + strand, within OLJFJH_00705 at 55.711 kb on - strand, within OLJFJH_00705 at 55.713 kb on + strand, within OLJFJH_00705 at 55.754 kb on + strand, within OLJFJH_00705 at 55.755 kb on - strand, within OLJFJH_00705 at 55.808 kb on + strand, within OLJFJH_00705 at 55.809 kb on - strand, within OLJFJH_00705 at 55.809 kb on - strand, within OLJFJH_00705 at 55.809 kb on - strand, within OLJFJH_00705 at 55.830 kb on + strand, within OLJFJH_00705 at 55.831 kb on - strand, within OLJFJH_00705 at 55.868 kb on + strand, within OLJFJH_00705 at 55.868 kb on + strand, within OLJFJH_00705 at 55.868 kb on + strand, within OLJFJH_00705 at 55.868 kb on + strand, within OLJFJH_00705 at 55.868 kb on + strand, within OLJFJH_00705 at 55.872 kb on + strand, within OLJFJH_00705 at 55.873 kb on - strand, within OLJFJH_00705 at 55.898 kb on + strand, within OLJFJH_00705 at 55.898 kb on + strand, within OLJFJH_00705 at 55.898 kb on + strand, within OLJFJH_00705 at 55.898 kb on + strand, within OLJFJH_00705 at 55.898 kb on + strand, within OLJFJH_00705 at 55.898 kb on + strand, within OLJFJH_00705 at 55.899 kb on - strand, within OLJFJH_00705 at 55.899 kb on - strand, within OLJFJH_00705 at 55.899 kb on - strand, within OLJFJH_00705 at 55.899 kb on - strand, within OLJFJH_00705 at 56.105 kb on + strand, within OLJFJH_00705 at 56.133 kb on + strand, within OLJFJH_00705 at 56.134 kb on - strand, within OLJFJH_00705 at 56.142 kb on + strand, within OLJFJH_00705 at 56.360 kb on + strand, within OLJFJH_00705 at 56.390 kb on + strand, within OLJFJH_00705 at 56.397 kb on - strand, within OLJFJH_00705
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 53,936 + OLJFJH_00695 0.22 -2.8 53,937 - OLJFJH_00695 0.22 +0.5 54,251 - OLJFJH_00695 0.57 -2.0 54,293 - OLJFJH_00695 0.62 -1.2 54,445 - OLJFJH_00695 0.79 +0.8 54,450 + OLJFJH_00695 0.80 -0.4 54,450 + OLJFJH_00695 0.80 -1.1 54,451 - OLJFJH_00695 0.80 -1.4 54,451 - OLJFJH_00695 0.80 -2.0 54,451 - OLJFJH_00695 0.80 -0.4 54,547 - -0.3 54,631 + +0.4 54,645 - +0.6 54,704 + +0.0 54,704 + -0.1 54,704 + -2.9 54,704 + -1.0 54,705 - -2.4 54,705 - -0.0 54,705 - -0.3 54,705 - -1.1 54,705 - -2.0 54,707 - -1.5 54,707 - -1.3 55,173 - OLJFJH_00700 0.67 +0.2 55,173 - OLJFJH_00700 0.67 -2.2 55,173 - OLJFJH_00700 0.67 -0.8 55,303 - OLJFJH_00700 0.83 -1.5 55,303 - OLJFJH_00700 0.83 -2.0 55,357 + -1.9 55,565 + -0.5 55,594 - -0.1 55,662 + -0.6 55,662 + +0.3 55,662 + -0.7 55,662 + -1.0 55,663 - -0.1 55,710 + OLJFJH_00705 0.10 -0.2 55,711 - OLJFJH_00705 0.10 -0.2 55,713 + OLJFJH_00705 0.10 +1.8 55,754 + OLJFJH_00705 0.12 -0.8 55,755 - OLJFJH_00705 0.12 -0.3 55,808 + OLJFJH_00705 0.15 +2.2 55,809 - OLJFJH_00705 0.15 -0.2 55,809 - OLJFJH_00705 0.15 +0.0 55,809 - OLJFJH_00705 0.15 -0.7 55,830 + OLJFJH_00705 0.16 -0.2 55,831 - OLJFJH_00705 0.16 -0.3 55,868 + OLJFJH_00705 0.17 -0.4 55,868 + OLJFJH_00705 0.17 +0.3 55,868 + OLJFJH_00705 0.17 +0.6 55,868 + OLJFJH_00705 0.17 -1.3 55,868 + OLJFJH_00705 0.17 -1.4 55,872 + OLJFJH_00705 0.18 +0.3 55,873 - OLJFJH_00705 0.18 -0.3 55,898 + OLJFJH_00705 0.19 +0.7 55,898 + OLJFJH_00705 0.19 -0.6 55,898 + OLJFJH_00705 0.19 -1.1 55,898 + OLJFJH_00705 0.19 +1.1 55,898 + OLJFJH_00705 0.19 -0.2 55,898 + OLJFJH_00705 0.19 -0.9 55,899 - OLJFJH_00705 0.19 +0.4 55,899 - OLJFJH_00705 0.19 +0.3 55,899 - OLJFJH_00705 0.19 -0.3 55,899 - OLJFJH_00705 0.19 -0.1 56,105 + OLJFJH_00705 0.28 -2.0 56,133 + OLJFJH_00705 0.29 -0.5 56,134 - OLJFJH_00705 0.29 +0.9 56,142 + OLJFJH_00705 0.30 +1.8 56,360 + OLJFJH_00705 0.40 -0.1 56,390 + OLJFJH_00705 0.41 -0.3 56,397 - OLJFJH_00705 0.41 -0.4
Or see this region's nucleotide sequence