Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_00685 and OLJFJH_00690 are separated by 41 nucleotides OLJFJH_00690 and OLJFJH_00695 overlap by 1 nucleotides OLJFJH_00695 and OLJFJH_00700 are separated by 14 nucleotides
OLJFJH_00685: OLJFJH_00685 - glutamate-1-semialdehyde 2 1-aminomutase, at 50,449 to 51,729
_00685
OLJFJH_00690: OLJFJH_00690 - Fe(3+)-hydroxamate ABC transporter permease FhuB, at 51,771 to 53,747
_00690
OLJFJH_00695: OLJFJH_00695 - Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD, at 53,747 to 54,625
_00695
OLJFJH_00700: OLJFJH_00700 - Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC, at 54,640 to 55,434
_00700
Position (kb) 51
52
53
54 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 51.727 kb on + strand at 51.728 kb on - strand at 51.780 kb on - strand at 51.784 kb on - strand at 51.791 kb on - strand at 51.791 kb on - strand at 51.794 kb on + strand at 51.795 kb on - strand at 51.795 kb on - strand at 51.795 kb on - strand at 51.795 kb on - strand at 51.799 kb on + strand at 51.799 kb on + strand at 51.812 kb on + strand at 52.182 kb on + strand, within OLJFJH_00690 at 52.198 kb on + strand, within OLJFJH_00690 at 52.355 kb on + strand, within OLJFJH_00690 at 52.355 kb on + strand, within OLJFJH_00690 at 52.355 kb on + strand, within OLJFJH_00690 at 52.355 kb on + strand, within OLJFJH_00690 at 52.355 kb on + strand, within OLJFJH_00690 at 52.355 kb on + strand, within OLJFJH_00690 at 52.355 kb on + strand, within OLJFJH_00690 at 52.355 kb on + strand, within OLJFJH_00690 at 52.356 kb on - strand, within OLJFJH_00690 at 52.356 kb on - strand, within OLJFJH_00690 at 52.356 kb on - strand, within OLJFJH_00690 at 52.359 kb on + strand, within OLJFJH_00690 at 52.515 kb on + strand, within OLJFJH_00690 at 53.128 kb on - strand, within OLJFJH_00690 at 53.143 kb on - strand, within OLJFJH_00690 at 53.229 kb on - strand, within OLJFJH_00690 at 53.229 kb on - strand, within OLJFJH_00690 at 53.229 kb on - strand, within OLJFJH_00690 at 53.229 kb on - strand, within OLJFJH_00690 at 53.236 kb on - strand, within OLJFJH_00690 at 53.250 kb on - strand, within OLJFJH_00690 at 53.250 kb on - strand, within OLJFJH_00690 at 53.936 kb on + strand, within OLJFJH_00695 at 53.937 kb on - strand, within OLJFJH_00695 at 54.251 kb on - strand, within OLJFJH_00695 at 54.293 kb on - strand, within OLJFJH_00695 at 54.445 kb on - strand, within OLJFJH_00695 at 54.450 kb on + strand, within OLJFJH_00695 at 54.450 kb on + strand, within OLJFJH_00695 at 54.451 kb on - strand, within OLJFJH_00695 at 54.451 kb on - strand, within OLJFJH_00695 at 54.451 kb on - strand, within OLJFJH_00695 at 54.547 kb on - strand at 54.631 kb on + strand at 54.645 kb on - strand at 54.704 kb on + strand at 54.704 kb on + strand at 54.704 kb on + strand at 54.704 kb on + strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.705 kb on - strand at 54.707 kb on - strand at 54.707 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8 remove 51,727 + -0.1 51,728 - +0.8 51,780 - +1.3 51,784 - +1.6 51,791 - +1.0 51,791 - -0.6 51,794 + +0.0 51,795 - -1.0 51,795 - +0.3 51,795 - -0.3 51,795 - -1.5 51,799 + -1.2 51,799 + +0.6 51,812 + -1.7 52,182 + OLJFJH_00690 0.21 -1.7 52,198 + OLJFJH_00690 0.22 -2.5 52,355 + OLJFJH_00690 0.30 +0.7 52,355 + OLJFJH_00690 0.30 -1.1 52,355 + OLJFJH_00690 0.30 -0.9 52,355 + OLJFJH_00690 0.30 -0.2 52,355 + OLJFJH_00690 0.30 +2.0 52,355 + OLJFJH_00690 0.30 -1.3 52,355 + OLJFJH_00690 0.30 -0.6 52,355 + OLJFJH_00690 0.30 -0.4 52,356 - OLJFJH_00690 0.30 -1.2 52,356 - OLJFJH_00690 0.30 +0.0 52,356 - OLJFJH_00690 0.30 +0.5 52,359 + OLJFJH_00690 0.30 -0.0 52,515 + OLJFJH_00690 0.38 -0.8 53,128 - OLJFJH_00690 0.69 -2.0 53,143 - OLJFJH_00690 0.69 -1.0 53,229 - OLJFJH_00690 0.74 -1.0 53,229 - OLJFJH_00690 0.74 -1.1 53,229 - OLJFJH_00690 0.74 -0.2 53,229 - OLJFJH_00690 0.74 -3.2 53,236 - OLJFJH_00690 0.74 -1.6 53,250 - OLJFJH_00690 0.75 -0.2 53,250 - OLJFJH_00690 0.75 +0.4 53,936 + OLJFJH_00695 0.22 -2.8 53,937 - OLJFJH_00695 0.22 +0.5 54,251 - OLJFJH_00695 0.57 -2.0 54,293 - OLJFJH_00695 0.62 -1.2 54,445 - OLJFJH_00695 0.79 +0.8 54,450 + OLJFJH_00695 0.80 -0.4 54,450 + OLJFJH_00695 0.80 -1.1 54,451 - OLJFJH_00695 0.80 -1.4 54,451 - OLJFJH_00695 0.80 -2.0 54,451 - OLJFJH_00695 0.80 -0.4 54,547 - -0.3 54,631 + +0.4 54,645 - +0.6 54,704 + +0.0 54,704 + -0.1 54,704 + -2.9 54,704 + -1.0 54,705 - -2.4 54,705 - -0.0 54,705 - -0.3 54,705 - -1.1 54,705 - -2.0 54,707 - -1.5 54,707 - -1.3
Or see this region's nucleotide sequence