Strain Fitness in Escherichia coli ECRC100 around OKFHMN_18955

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
3,680,862	+				+0.2
3,681,016	+	yqhC	OKFHMN_18950	0.20	+0.4
3,681,016	+	yqhC	OKFHMN_18950	0.20	+0.6
3,681,017	-	yqhC	OKFHMN_18950	0.20	-0.3
3,681,051	+	yqhC	OKFHMN_18950	0.24	+1.8
3,681,063	+	yqhC	OKFHMN_18950	0.25	-1.9
3,681,064	-	yqhC	OKFHMN_18950	0.25	-0.1
3,681,348	+	yqhC	OKFHMN_18950	0.55	-1.5
3,681,349	-	yqhC	OKFHMN_18950	0.55	-3.4
3,681,487	+	yqhC	OKFHMN_18950	0.70	-0.3
3,681,487	+	yqhC	OKFHMN_18950	0.70	-0.2
3,681,528	+	yqhC	OKFHMN_18950	0.74	+0.4
3,681,528	+	yqhC	OKFHMN_18950	0.74	-1.1
3,681,528	+	yqhC	OKFHMN_18950	0.74	-0.1
3,681,529	-	yqhC	OKFHMN_18950	0.74	+1.1
3,681,532	-	yqhC	OKFHMN_18950	0.74	+0.6
3,681,555	+	yqhC	OKFHMN_18950	0.77	-0.1
3,681,555	+	yqhC	OKFHMN_18950	0.77	+1.8
3,681,562	-	yqhC	OKFHMN_18950	0.77	-1.3
3,681,593	-	yqhC	OKFHMN_18950	0.81	+0.0
3,681,604	+	yqhC	OKFHMN_18950	0.82	+0.4
3,681,605	-	yqhC	OKFHMN_18950	0.82	-0.1
3,681,700	-				-0.7
3,681,700	-				+0.1
3,681,718	+				-0.4
3,681,775	+				+0.4
3,681,776	-				-2.0
3,681,914	-	yghB	OKFHMN_18955	0.15	-1.5
3,681,914	-	yghB	OKFHMN_18955	0.15	-0.3
3,681,949	-	yghB	OKFHMN_18955	0.20	-3.4
3,681,952	+	yghB	OKFHMN_18955	0.20	-0.8
3,681,952	+	yghB	OKFHMN_18955	0.20	-2.8
3,681,952	+	yghB	OKFHMN_18955	0.20	-0.5
3,681,952	+	yghB	OKFHMN_18955	0.20	-0.6
3,681,953	-	yghB	OKFHMN_18955	0.21	+0.4
3,681,953	-	yghB	OKFHMN_18955	0.21	+0.7
3,682,149	-	yghB	OKFHMN_18955	0.50	-0.0
3,682,152	+	yghB	OKFHMN_18955	0.51	-0.4
3,682,215	+	yghB	OKFHMN_18955	0.60	+0.3
3,682,218	-	yghB	OKFHMN_18955	0.61	-0.4
3,682,218	-	yghB	OKFHMN_18955	0.61	+0.2
3,682,218	-	yghB	OKFHMN_18955	0.61	+0.0
3,682,407	+	yghB	OKFHMN_18955	0.89	+0.4
3,682,458	+				-0.7
3,682,459	-				-1.2
3,682,467	+				-3.2
3,682,509	-				+0.4
3,682,516	+				-2.4
3,682,522	-				-1.0
3,682,522	-				+0.2
3,682,581	+				-0.5
3,682,582	-				+0.0
3,682,618	-				-0.5
3,682,682	-				-4.7
3,682,742	-	metC	OKFHMN_18960	0.11	-5.0
3,682,792	-	metC	OKFHMN_18960	0.15	-3.2
3,682,817	-	metC	OKFHMN_18960	0.17	-3.9
3,682,858	+	metC	OKFHMN_18960	0.20	-2.5
3,682,858	+	metC	OKFHMN_18960	0.20	-4.0
3,682,875	-	metC	OKFHMN_18960	0.22	-2.5
3,682,945	+	metC	OKFHMN_18960	0.28	-3.9
3,683,051	+	metC	OKFHMN_18960	0.37	-2.6
3,683,052	-	metC	OKFHMN_18960	0.37	-3.3
3,683,053	+	metC	OKFHMN_18960	0.37	-3.3
3,683,053	+	metC	OKFHMN_18960	0.37	-2.3
3,683,054	-	metC	OKFHMN_18960	0.37	-5.7
3,683,054	-	metC	OKFHMN_18960	0.37	-3.1
3,683,054	-	metC	OKFHMN_18960	0.37	-1.9
3,683,054	-	metC	OKFHMN_18960	0.37	-4.0
3,683,055	+	metC	OKFHMN_18960	0.37	-2.2
3,683,055	+	metC	OKFHMN_18960	0.37	-3.6
3,683,192	-	metC	OKFHMN_18960	0.48	-3.4
3,683,192	-	metC	OKFHMN_18960	0.48	-2.8
3,683,192	-	metC	OKFHMN_18960	0.48	-4.3
3,683,257	+	metC	OKFHMN_18960	0.54	-1.3
3,683,258	-	metC	OKFHMN_18960	0.54	-4.5
3,683,323	+	metC	OKFHMN_18960	0.60	-2.9
3,683,324	-	metC	OKFHMN_18960	0.60	-2.7