Strain Fitness in Escherichia coli ECRC100 around OKFHMN_12230

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
2,340,822	-	rnr	OKFHMN_12220	0.87	-0.2
2,340,920	+				-0.4
2,341,063	+				-0.5
2,341,090	-				-2.0
2,341,200	+				-0.5
2,341,201	-				+0.4
2,341,205	+				-0.4
2,341,246	+	nsrR	OKFHMN_12225	0.14	-0.5
2,341,247	-	nsrR	OKFHMN_12225	0.15	-1.0
2,341,247	-	nsrR	OKFHMN_12225	0.15	-2.6
2,341,251	-	nsrR	OKFHMN_12225	0.15	-1.8
2,341,316	+	nsrR	OKFHMN_12225	0.31	-1.6
2,341,316	+	nsrR	OKFHMN_12225	0.31	-0.1
2,341,317	-	nsrR	OKFHMN_12225	0.31	-1.3
2,341,317	-	nsrR	OKFHMN_12225	0.31	-0.1
2,341,385	+	nsrR	OKFHMN_12225	0.47	+0.0
2,341,385	+	nsrR	OKFHMN_12225	0.47	-0.1
2,341,386	-	nsrR	OKFHMN_12225	0.47	-0.4
2,341,386	-	nsrR	OKFHMN_12225	0.47	-1.7
2,341,386	-	nsrR	OKFHMN_12225	0.47	-0.3
2,341,386	-	nsrR	OKFHMN_12225	0.47	-1.3
2,341,386	-	nsrR	OKFHMN_12225	0.47	-0.7
2,341,386	-	nsrR	OKFHMN_12225	0.47	-1.8
2,341,487	+	nsrR	OKFHMN_12225	0.71	-0.4
2,341,488	-	nsrR	OKFHMN_12225	0.71	+0.8
2,341,508	-	nsrR	OKFHMN_12225	0.76	-1.2
2,341,529	+	nsrR	OKFHMN_12225	0.81	-0.4
2,341,564	+	nsrR	OKFHMN_12225	0.89	-1.9
2,341,579	-				-0.5
2,341,579	-				-0.3
2,341,585	+				+1.3
2,341,586	-				-1.0
2,341,647	+				-2.6
2,341,648	-				-0.8
2,341,648	-				-0.4
2,341,649	+				-1.2
2,341,650	-				-0.3
2,341,650	-				+0.5
2,341,721	+				-0.3
2,341,722	-				-0.2
2,341,766	+				+0.5
2,341,767	-				+0.3
2,341,767	-				-0.6
2,341,767	-				+0.6
2,341,878	-				-0.8
2,342,338	+	purA	OKFHMN_12230	0.40	-2.2
2,342,587	+	purA	OKFHMN_12230	0.59	-1.6
2,342,588	-	purA	OKFHMN_12230	0.60	-0.1
2,342,588	-	purA	OKFHMN_12230	0.60	-0.6
2,342,694	-	purA	OKFHMN_12230	0.68	-0.2
2,342,694	-	purA	OKFHMN_12230	0.68	-1.5
2,342,702	-	purA	OKFHMN_12230	0.68	-2.2
2,342,702	-	purA	OKFHMN_12230	0.68	-2.1
2,342,920	-	purA	OKFHMN_12230	0.85	-1.7
2,342,920	-	purA	OKFHMN_12230	0.85	-1.2
2,342,949	-	purA	OKFHMN_12230	0.87	-1.0
2,343,026	-				-1.6
2,343,026	-				-1.2
2,343,060	-				-2.5
2,343,168	+				-0.1
2,343,169	-				-0.5
2,343,242	+	yjeT	OKFHMN_12235	0.13	-0.2
2,343,243	-	yjeT	OKFHMN_12235	0.13	-0.7
2,343,243	-	yjeT	OKFHMN_12235	0.13	+0.0
2,343,243	-	yjeT	OKFHMN_12235	0.13	-0.4
2,343,243	-	yjeT	OKFHMN_12235	0.13	-2.0
2,343,243	-	yjeT	OKFHMN_12235	0.13	+0.1
2,343,289	+	yjeT	OKFHMN_12235	0.36	+0.8
2,343,420	-				+0.3
2,343,471	-				-0.4
2,343,471	-				-0.4
2,343,492	+				-0.7
2,343,493	-				+0.8
2,343,594	-				+0.3
2,343,910	-	hflC	OKFHMN_12240	0.41	+0.6
2,343,910	-	hflC	OKFHMN_12240	0.41	+0.5
2,344,049	-	hflC	OKFHMN_12240	0.55	-0.9