Strain Fitness in Escherichia coli ECRC100 around OKFHMN_08285

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
1,537,747	+	mdlA	OKFHMN_08275	0.82	+0.2
1,537,814	-	mdlA	OKFHMN_08275	0.86	+0.2
1,537,916	+				-1.9
1,537,949	+				+0.5
1,537,949	+				-0.3
1,537,950	-				+0.7
1,538,041	+				+0.0
1,538,041	+				+0.5
1,538,042	-				+0.6
1,538,050	-				+0.3
1,538,050	-				+0.5
1,538,096	+				-0.5
1,538,129	-				+0.1
1,538,197	-	decR	OKFHMN_08280	0.21	-0.4
1,538,197	-	decR	OKFHMN_08280	0.21	+0.4
1,538,251	-	decR	OKFHMN_08280	0.33	-0.1
1,538,379	-	decR	OKFHMN_08280	0.61	-1.7
1,538,519	+				-1.3
1,538,523	-				+0.7
1,538,552	+				-0.7
1,538,552	+				-0.6
1,538,553	-				-0.1
1,538,553	-				+0.2
1,538,558	-				+2.4
1,538,588	+				-0.9
1,538,594	+				-0.1
1,538,595	-				+0.1
1,538,621	+				+0.8
1,538,722	+				+0.4
1,538,727	+				+0.3
1,538,727	+				+0.2
1,538,759	-				+2.0
1,538,843	+	cof	OKFHMN_08285	0.16	+0.6
1,538,846	+	cof	OKFHMN_08285	0.17	-1.2
1,538,847	-	cof	OKFHMN_08285	0.17	+0.5
1,538,923	-	cof	OKFHMN_08285	0.26	+0.3
1,538,929	-	cof	OKFHMN_08285	0.27	+0.0
1,539,152	+	cof	OKFHMN_08285	0.54	+1.0
1,539,154	+	cof	OKFHMN_08285	0.54	+1.1
1,539,155	-	cof	OKFHMN_08285	0.54	-0.7
1,539,219	-	cof	OKFHMN_08285	0.62	-0.0
1,539,251	-	cof	OKFHMN_08285	0.66	+0.3
1,539,251	-	cof	OKFHMN_08285	0.66	+0.4
1,539,469	-				-0.8
1,539,490	-				+0.5
1,539,577	+				+1.3
1,539,580	-				+0.4
1,539,581	+				-0.1
1,539,581	+				-0.1
1,539,603	+				-1.0
1,539,610	+				+0.5
1,539,750	-				+0.0
1,539,853	+	ybaE	OKFHMN_08290	0.13	-0.2
1,539,998	+	ybaE	OKFHMN_08290	0.22	-2.6
1,539,998	+	ybaE	OKFHMN_08290	0.22	-1.6
1,539,999	-	ybaE	OKFHMN_08290	0.22	-0.3
1,540,028	-	ybaE	OKFHMN_08290	0.24	+1.0
1,540,079	-	ybaE	OKFHMN_08290	0.27	+0.2
1,540,106	+	ybaE	OKFHMN_08290	0.28	+1.1
1,540,180	-	ybaE	OKFHMN_08290	0.33	+0.1
1,540,220	-	ybaE	OKFHMN_08290	0.35	+0.7
1,540,234	+	ybaE	OKFHMN_08290	0.36	-0.5
1,540,235	-	ybaE	OKFHMN_08290	0.36	+0.4
1,540,247	-	ybaE	OKFHMN_08290	0.36	+0.6
1,540,289	+	ybaE	OKFHMN_08290	0.39	-0.1
1,540,340	-	ybaE	OKFHMN_08290	0.42	-0.2
1,540,380	+	ybaE	OKFHMN_08290	0.44	-0.5
1,540,380	+	ybaE	OKFHMN_08290	0.44	+1.2
1,540,492	+	ybaE	OKFHMN_08290	0.51	-0.9
1,540,492	+	ybaE	OKFHMN_08290	0.51	-0.4
1,540,493	-	ybaE	OKFHMN_08290	0.51	+0.9