Strain Fitness in Escherichia coli ECRC100 around OKFHMN_08255

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
1,530,887	-	atl	OKFHMN_08245	0.78	+0.2
1,530,931	+				-0.8
1,530,931	+				-0.1
1,530,951	+				-0.6
1,530,954	+				+0.6
1,530,954	+				-0.4
1,530,954	+				-0.3
1,530,955	-				+0.6
1,530,983	+				+0.1
1,530,991	-				+0.0
1,531,172	-	ybaY	OKFHMN_08250	0.32	+0.8
1,531,172	-	ybaY	OKFHMN_08250	0.32	+0.5
1,531,196	-	ybaY	OKFHMN_08250	0.36	-0.3
1,531,216	+	ybaY	OKFHMN_08250	0.40	-0.0
1,531,217	-	ybaY	OKFHMN_08250	0.40	-0.2
1,531,279	+	ybaY	OKFHMN_08250	0.51	-0.4
1,531,280	-	ybaY	OKFHMN_08250	0.51	+0.1
1,531,280	-	ybaY	OKFHMN_08250	0.51	+0.6
1,531,288	+	ybaY	OKFHMN_08250	0.52	-0.9
1,531,576	+				+0.7
1,531,632	-				-0.5
1,531,672	+				+0.9
1,531,673	-				-0.3
1,531,677	-				+0.1
1,531,730	-				+0.2
1,531,776	+				-0.1
1,531,777	-				-0.0
1,531,880	-	tesB	OKFHMN_08255	0.12	+0.4
1,531,911	+	tesB	OKFHMN_08255	0.15	-0.4
1,531,911	+	tesB	OKFHMN_08255	0.15	-2.2
1,531,948	+	tesB	OKFHMN_08255	0.20	+0.3
1,531,949	-	tesB	OKFHMN_08255	0.20	-1.1
1,531,966	-	tesB	OKFHMN_08255	0.22	-0.2
1,531,966	-	tesB	OKFHMN_08255	0.22	+0.1
1,532,005	-	tesB	OKFHMN_08255	0.26	+0.9
1,532,088	-	tesB	OKFHMN_08255	0.36	-0.6
1,532,223	-	tesB	OKFHMN_08255	0.52	-0.2
1,532,223	-	tesB	OKFHMN_08255	0.52	+2.4
1,532,368	-	tesB	OKFHMN_08255	0.68	+1.0
1,532,407	+	tesB	OKFHMN_08255	0.73	-1.5
1,532,414	-	tesB	OKFHMN_08255	0.74	-0.6
1,532,495	+	tesB	OKFHMN_08255	0.83	+0.2
1,532,517	+	tesB	OKFHMN_08255	0.86	+0.1
1,532,518	-	tesB	OKFHMN_08255	0.86	+0.6
1,532,690	-				+1.2
1,532,699	-				+0.3
1,532,699	-				+0.7
1,532,796	-				+0.5
1,532,796	-				+0.1
1,532,930	+	amtB	OKFHMN_08260	0.19	-1.0
1,533,283	+	amtB	OKFHMN_08260	0.46	-0.8
1,533,283	+	amtB	OKFHMN_08260	0.46	-0.2
1,533,370	+	amtB	OKFHMN_08260	0.53	-0.6
1,533,405	-	amtB	OKFHMN_08260	0.56	-2.0
1,533,490	+	amtB	OKFHMN_08260	0.62	+1.0
1,533,491	-	amtB	OKFHMN_08260	0.62	+0.2
1,533,615	-	amtB	OKFHMN_08260	0.72	+0.4
1,533,617	-	amtB	OKFHMN_08260	0.72	-0.2
1,533,622	+	amtB	OKFHMN_08260	0.73	-0.4
1,533,623	-	amtB	OKFHMN_08260	0.73	+0.7