Strain Fitness in Escherichia coli ECRC100 around OKFHMN_01260

Experiment: Sodium-DL-Lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntydeO and ydeN are separated by 403 nucleotidesydeN and ydeM are separated by 51 nucleotides OKFHMN_01255: ydeO - acid stress response transcriptional regulator YdeO, at 146,123 to 146,884 ydeO OKFHMN_01260: ydeN - Uncharacterized sulfatase YdeN, at 147,288 to 148,970 ydeN OKFHMN_01265: ydeM - anaerobic sulfatase maturase, at 149,022 to 150,179 ydeM Position (kb) 147 148 149Strain fitness (log2 ratio) -1 0 1at 147.465 kb on - strand, within ydeN

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Per-strain Table

Position Strand Gene LocusTag Fraction Sodium-DL-Lactate
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147,465 - ydeN OKFHMN_01260 0.11 -1.7

Or see this region's nucleotide sequence