Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yehI and OKFHMN_23985 are separated by 9 nucleotides OKFHMN_23985 and OKFHMN_23990 overlap by 35 nucleotides
OKFHMN_23980: yehI - Uncharacterized protein YehI, at 4,673,133 to 4,676,762
yehI
OKFHMN_23985: OKFHMN_23985 - DUF4132 domain-containing protein, at 4,676,772 to 4,678,511
_23985
OKFHMN_23990: OKFHMN_23990 - Interrupted molybdate metabolism regulator, at 4,678,477 to 4,679,757
_23990
Position (kb)
4676
4677
4678
4679 Strain fitness (log2 ratio)
-2
-1
0
1 at 4675.894 kb on + strand, within yehI at 4675.895 kb on - strand, within yehI at 4675.895 kb on - strand, within yehI at 4675.984 kb on + strand, within yehI at 4676.003 kb on + strand, within yehI at 4676.162 kb on + strand, within yehI at 4676.210 kb on + strand, within yehI at 4676.326 kb on + strand, within yehI at 4676.392 kb on - strand, within yehI at 4676.439 kb on + strand at 4676.439 kb on + strand at 4676.508 kb on - strand at 4676.568 kb on - strand at 4676.749 kb on - strand at 4676.799 kb on - strand at 4676.803 kb on - strand at 4676.858 kb on + strand at 4676.980 kb on - strand, within OKFHMN_23985 at 4677.149 kb on - strand, within OKFHMN_23985 at 4677.156 kb on - strand, within OKFHMN_23985 at 4677.181 kb on - strand, within OKFHMN_23985 at 4677.191 kb on - strand, within OKFHMN_23985 at 4677.266 kb on + strand, within OKFHMN_23985 at 4677.311 kb on - strand, within OKFHMN_23985 at 4677.928 kb on - strand, within OKFHMN_23985 at 4678.068 kb on - strand, within OKFHMN_23985 at 4678.309 kb on - strand, within OKFHMN_23985 at 4678.463 kb on + strand at 4678.475 kb on + strand at 4678.639 kb on - strand, within OKFHMN_23990 at 4678.652 kb on - strand, within OKFHMN_23990 at 4678.655 kb on - strand, within OKFHMN_23990 at 4678.680 kb on - strand, within OKFHMN_23990 at 4678.680 kb on - strand, within OKFHMN_23990 at 4678.680 kb on - strand, within OKFHMN_23990 at 4678.846 kb on + strand, within OKFHMN_23990 at 4678.867 kb on + strand, within OKFHMN_23990 at 4678.868 kb on - strand, within OKFHMN_23990 at 4679.088 kb on - strand, within OKFHMN_23990 at 4679.179 kb on - strand, within OKFHMN_23990 at 4679.415 kb on + strand, within OKFHMN_23990 at 4679.458 kb on + strand, within OKFHMN_23990
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,675,894 + yehI OKFHMN_23980 0.76 -0.1 4,675,895 - yehI OKFHMN_23980 0.76 -0.6 4,675,895 - yehI OKFHMN_23980 0.76 +0.1 4,675,984 + yehI OKFHMN_23980 0.79 +0.4 4,676,003 + yehI OKFHMN_23980 0.79 -1.7 4,676,162 + yehI OKFHMN_23980 0.83 -1.5 4,676,210 + yehI OKFHMN_23980 0.85 -0.6 4,676,326 + yehI OKFHMN_23980 0.88 -0.2 4,676,392 - yehI OKFHMN_23980 0.90 -0.9 4,676,439 + +0.1 4,676,439 + +0.3 4,676,508 - -2.1 4,676,568 - +0.4 4,676,749 - -0.1 4,676,799 - +0.9 4,676,803 - -0.9 4,676,858 + -0.9 4,676,980 - OKFHMN_23985 0.12 +0.1 4,677,149 - OKFHMN_23985 0.22 +0.7 4,677,156 - OKFHMN_23985 0.22 +0.8 4,677,181 - OKFHMN_23985 0.24 +0.3 4,677,191 - OKFHMN_23985 0.24 -0.1 4,677,266 + OKFHMN_23985 0.28 +0.3 4,677,311 - OKFHMN_23985 0.31 -0.0 4,677,928 - OKFHMN_23985 0.66 -0.1 4,678,068 - OKFHMN_23985 0.74 -1.8 4,678,309 - OKFHMN_23985 0.88 +0.4 4,678,463 + -0.1 4,678,475 + -2.6 4,678,639 - OKFHMN_23990 0.13 -1.7 4,678,652 - OKFHMN_23990 0.14 -2.1 4,678,655 - OKFHMN_23990 0.14 +0.9 4,678,680 - OKFHMN_23990 0.16 -1.0 4,678,680 - OKFHMN_23990 0.16 +0.5 4,678,680 - OKFHMN_23990 0.16 -0.8 4,678,846 + OKFHMN_23990 0.29 -0.1 4,678,867 + OKFHMN_23990 0.30 -1.0 4,678,868 - OKFHMN_23990 0.31 -0.5 4,679,088 - OKFHMN_23990 0.48 +0.5 4,679,179 - OKFHMN_23990 0.55 -0.2 4,679,415 + OKFHMN_23990 0.73 +1.3 4,679,458 + OKFHMN_23990 0.77 +0.0
Or see this region's nucleotide sequence