Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt eutE and eutJ are separated by 10 nucleotides eutJ and eutG overlap by 11 nucleotides
OKFHMN_22045: eutE - Acetaldehyde dehydrogenase (acetylating) EutE, at 4,286,632 to 4,288,035
eutE
OKFHMN_22050: eutJ - ethanolamine utilization protein EutJ, at 4,288,046 to 4,288,882
eutJ
OKFHMN_22055: eutG - ethanolamine utilization ethanol dehydrogenase EutG, at 4,288,872 to 4,290,059
eutG
Position (kb)
4288
4289 Strain fitness (log2 ratio)
-2
-1
0
1 at 4287.056 kb on + strand, within eutE at 4287.057 kb on - strand, within eutE at 4287.057 kb on - strand, within eutE at 4287.057 kb on - strand, within eutE at 4287.060 kb on + strand, within eutE at 4287.061 kb on - strand, within eutE at 4287.061 kb on - strand, within eutE at 4287.195 kb on - strand, within eutE at 4287.201 kb on + strand, within eutE at 4287.202 kb on - strand, within eutE at 4287.293 kb on + strand, within eutE at 4287.649 kb on - strand, within eutE at 4287.862 kb on - strand, within eutE at 4288.007 kb on + strand at 4288.008 kb on - strand at 4288.354 kb on + strand, within eutJ at 4288.354 kb on + strand, within eutJ at 4288.468 kb on - strand, within eutJ at 4288.527 kb on - strand, within eutJ at 4288.588 kb on + strand, within eutJ at 4288.645 kb on + strand, within eutJ at 4288.645 kb on + strand, within eutJ at 4288.694 kb on - strand, within eutJ at 4288.742 kb on - strand, within eutJ at 4288.800 kb on + strand at 4288.869 kb on + strand at 4288.869 kb on + strand at 4288.869 kb on + strand at 4289.371 kb on + strand, within eutG at 4289.372 kb on - strand, within eutG at 4289.532 kb on + strand, within eutG at 4289.533 kb on - strand, within eutG at 4289.550 kb on - strand, within eutG at 4289.669 kb on + strand, within eutG at 4289.771 kb on + strand, within eutG at 4289.772 kb on - strand, within eutG at 4289.876 kb on + strand, within eutG at 4289.876 kb on + strand, within eutG
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,287,056 + eutE OKFHMN_22045 0.30 -1.4 4,287,057 - eutE OKFHMN_22045 0.30 +0.6 4,287,057 - eutE OKFHMN_22045 0.30 +0.6 4,287,057 - eutE OKFHMN_22045 0.30 -2.0 4,287,060 + eutE OKFHMN_22045 0.30 -0.0 4,287,061 - eutE OKFHMN_22045 0.31 +0.9 4,287,061 - eutE OKFHMN_22045 0.31 +0.2 4,287,195 - eutE OKFHMN_22045 0.40 -0.2 4,287,201 + eutE OKFHMN_22045 0.41 +0.9 4,287,202 - eutE OKFHMN_22045 0.41 +0.4 4,287,293 + eutE OKFHMN_22045 0.47 -0.0 4,287,649 - eutE OKFHMN_22045 0.72 +0.7 4,287,862 - eutE OKFHMN_22045 0.88 -1.6 4,288,007 + -0.2 4,288,008 - -0.5 4,288,354 + eutJ OKFHMN_22050 0.37 -0.9 4,288,354 + eutJ OKFHMN_22050 0.37 +0.1 4,288,468 - eutJ OKFHMN_22050 0.50 -0.9 4,288,527 - eutJ OKFHMN_22050 0.57 +0.0 4,288,588 + eutJ OKFHMN_22050 0.65 +0.7 4,288,645 + eutJ OKFHMN_22050 0.72 +0.4 4,288,645 + eutJ OKFHMN_22050 0.72 -0.1 4,288,694 - eutJ OKFHMN_22050 0.77 +0.5 4,288,742 - eutJ OKFHMN_22050 0.83 +0.8 4,288,800 + +0.6 4,288,869 + -0.1 4,288,869 + +0.3 4,288,869 + -0.8 4,289,371 + eutG OKFHMN_22055 0.42 +0.2 4,289,372 - eutG OKFHMN_22055 0.42 -1.2 4,289,532 + eutG OKFHMN_22055 0.56 +0.3 4,289,533 - eutG OKFHMN_22055 0.56 -0.6 4,289,550 - eutG OKFHMN_22055 0.57 +0.9 4,289,669 + eutG OKFHMN_22055 0.67 +0.5 4,289,771 + eutG OKFHMN_22055 0.76 -0.4 4,289,772 - eutG OKFHMN_22055 0.76 +0.1 4,289,876 + eutG OKFHMN_22055 0.85 +0.4 4,289,876 + eutG OKFHMN_22055 0.85 -0.1
Or see this region's nucleotide sequence