Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mutY and trmB are separated by 160 nucleotides trmB and yggL overlap by 1 nucleotides yggL and yggN are separated by 183 nucleotides
OKFHMN_19200: mutY - A/G-specific adenine glycosylase, at 3,730,732 to 3,731,784
mutY
OKFHMN_19205: trmB - tRNA (guanosine(46)-N7)-methyltransferase TrmB, at 3,731,945 to 3,732,664
trmB
OKFHMN_19210: yggL - Uncharacterized protein YggL, at 3,732,664 to 3,732,990
yggL
OKFHMN_19215: yggN - Uncharacterized protein YggN, at 3,733,174 to 3,733,893
yggN
Position (kb)
3731
3732
3733 Strain fitness (log2 ratio)
-2
-1
0
1 at 3731.012 kb on - strand, within mutY at 3731.072 kb on - strand, within mutY at 3731.143 kb on - strand, within mutY at 3731.143 kb on - strand, within mutY at 3731.143 kb on - strand, within mutY at 3731.143 kb on - strand, within mutY at 3731.160 kb on + strand, within mutY at 3731.160 kb on + strand, within mutY at 3731.161 kb on - strand, within mutY at 3731.161 kb on - strand, within mutY at 3731.339 kb on + strand, within mutY at 3731.339 kb on + strand, within mutY at 3731.340 kb on - strand, within mutY at 3731.686 kb on + strand at 3731.686 kb on + strand at 3731.687 kb on - strand at 3731.693 kb on + strand at 3731.736 kb on - strand at 3731.744 kb on + strand at 3731.841 kb on + strand at 3731.870 kb on + strand at 3731.893 kb on - strand at 3732.008 kb on - strand at 3732.065 kb on + strand, within trmB at 3732.066 kb on - strand, within trmB at 3732.101 kb on - strand, within trmB at 3732.279 kb on + strand, within trmB at 3732.280 kb on - strand, within trmB at 3732.325 kb on + strand, within trmB at 3732.326 kb on - strand, within trmB at 3732.326 kb on - strand, within trmB at 3732.505 kb on + strand, within trmB at 3732.505 kb on + strand, within trmB at 3732.505 kb on + strand, within trmB at 3732.505 kb on + strand, within trmB at 3732.505 kb on + strand, within trmB at 3732.505 kb on + strand, within trmB at 3732.506 kb on - strand, within trmB at 3732.527 kb on - strand, within trmB at 3732.563 kb on + strand, within trmB at 3732.563 kb on + strand, within trmB at 3732.563 kb on + strand, within trmB at 3732.563 kb on + strand, within trmB at 3732.564 kb on - strand, within trmB at 3732.642 kb on + strand at 3732.642 kb on + strand at 3732.643 kb on - strand at 3732.643 kb on - strand at 3732.760 kb on - strand, within yggL at 3732.953 kb on + strand, within yggL at 3733.040 kb on + strand at 3733.040 kb on + strand at 3733.041 kb on - strand at 3733.050 kb on - strand at 3733.087 kb on + strand at 3733.173 kb on + strand at 3733.173 kb on + strand at 3733.360 kb on + strand, within yggN at 3733.412 kb on + strand, within yggN at 3733.412 kb on + strand, within yggN at 3733.412 kb on + strand, within yggN at 3733.413 kb on - strand, within yggN at 3733.413 kb on - strand, within yggN at 3733.416 kb on + strand, within yggN at 3733.416 kb on + strand, within yggN at 3733.417 kb on - strand, within yggN at 3733.611 kb on + strand, within yggN at 3733.612 kb on - strand, within yggN at 3733.612 kb on - strand, within yggN
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 3,731,012 - mutY OKFHMN_19200 0.27 -0.0 3,731,072 - mutY OKFHMN_19200 0.32 +0.1 3,731,143 - mutY OKFHMN_19200 0.39 +0.3 3,731,143 - mutY OKFHMN_19200 0.39 -0.8 3,731,143 - mutY OKFHMN_19200 0.39 -0.9 3,731,143 - mutY OKFHMN_19200 0.39 +0.1 3,731,160 + mutY OKFHMN_19200 0.41 -0.0 3,731,160 + mutY OKFHMN_19200 0.41 +0.6 3,731,161 - mutY OKFHMN_19200 0.41 -0.4 3,731,161 - mutY OKFHMN_19200 0.41 -0.2 3,731,339 + mutY OKFHMN_19200 0.58 +0.0 3,731,339 + mutY OKFHMN_19200 0.58 -0.1 3,731,340 - mutY OKFHMN_19200 0.58 -0.8 3,731,686 + +0.3 3,731,686 + -1.8 3,731,687 - +0.8 3,731,693 + +0.0 3,731,736 - +0.3 3,731,744 + +0.7 3,731,841 + +0.2 3,731,870 + -0.3 3,731,893 - +0.8 3,732,008 - +0.0 3,732,065 + trmB OKFHMN_19205 0.17 +0.2 3,732,066 - trmB OKFHMN_19205 0.17 -0.2 3,732,101 - trmB OKFHMN_19205 0.22 +0.6 3,732,279 + trmB OKFHMN_19205 0.46 -0.2 3,732,280 - trmB OKFHMN_19205 0.47 +0.3 3,732,325 + trmB OKFHMN_19205 0.53 -0.1 3,732,326 - trmB OKFHMN_19205 0.53 -0.9 3,732,326 - trmB OKFHMN_19205 0.53 -0.5 3,732,505 + trmB OKFHMN_19205 0.78 +0.8 3,732,505 + trmB OKFHMN_19205 0.78 +0.4 3,732,505 + trmB OKFHMN_19205 0.78 +0.3 3,732,505 + trmB OKFHMN_19205 0.78 +0.2 3,732,505 + trmB OKFHMN_19205 0.78 +0.1 3,732,505 + trmB OKFHMN_19205 0.78 +0.1 3,732,506 - trmB OKFHMN_19205 0.78 -0.0 3,732,527 - trmB OKFHMN_19205 0.81 +0.9 3,732,563 + trmB OKFHMN_19205 0.86 -0.2 3,732,563 + trmB OKFHMN_19205 0.86 +0.7 3,732,563 + trmB OKFHMN_19205 0.86 +0.5 3,732,563 + trmB OKFHMN_19205 0.86 -0.5 3,732,564 - trmB OKFHMN_19205 0.86 -0.5 3,732,642 + -0.0 3,732,642 + -1.7 3,732,643 - +0.3 3,732,643 - +0.3 3,732,760 - yggL OKFHMN_19210 0.29 -0.5 3,732,953 + yggL OKFHMN_19210 0.88 -0.2 3,733,040 + +0.5 3,733,040 + -0.5 3,733,041 - -0.2 3,733,050 - -1.2 3,733,087 + +0.3 3,733,173 + +0.2 3,733,173 + -1.3 3,733,360 + yggN OKFHMN_19215 0.26 +0.2 3,733,412 + yggN OKFHMN_19215 0.33 +0.5 3,733,412 + yggN OKFHMN_19215 0.33 +0.8 3,733,412 + yggN OKFHMN_19215 0.33 -0.6 3,733,413 - yggN OKFHMN_19215 0.33 +0.2 3,733,413 - yggN OKFHMN_19215 0.33 +0.2 3,733,416 + yggN OKFHMN_19215 0.34 +0.3 3,733,416 + yggN OKFHMN_19215 0.34 +0.1 3,733,417 - yggN OKFHMN_19215 0.34 +0.8 3,733,611 + yggN OKFHMN_19215 0.61 +0.5 3,733,612 - yggN OKFHMN_19215 0.61 -0.3 3,733,612 - yggN OKFHMN_19215 0.61 +0.0
Or see this region's nucleotide sequence