Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt menA and rraA are separated by 92 nucleotides rraA and OKFHMN_13755 are separated by 59 nucleotides OKFHMN_13755 and OKFHMN_13760 are separated by 122 nucleotides OKFHMN_13760 and zapB are separated by 38 nucleotides
OKFHMN_13745: menA - 1,4-dihydroxy-2-naphthoate polyprenyltransferase, at 2,653,201 to 2,654,127
menA
OKFHMN_13750: rraA - ribonuclease E activity regulator RraA, at 2,654,220 to 2,654,705
rraA
OKFHMN_13755: OKFHMN_13755 - hypothetical protein, at 2,654,765 to 2,655,439
_13755
OKFHMN_13760: OKFHMN_13760 - hypothetical protein, at 2,655,562 to 2,656,188
_13760
OKFHMN_13765: zapB - septal ring assembly protein ZapB, at 2,656,227 to 2,656,466
zapB
Position (kb)
2654
2655
2656 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2653.797 kb on + strand, within menA at 2653.798 kb on - strand, within menA at 2653.798 kb on - strand, within menA at 2654.072 kb on + strand at 2654.125 kb on + strand at 2654.125 kb on + strand at 2654.126 kb on - strand at 2654.126 kb on - strand at 2654.137 kb on - strand at 2654.143 kb on + strand at 2654.182 kb on + strand at 2654.213 kb on + strand at 2654.213 kb on + strand at 2654.226 kb on + strand at 2654.226 kb on + strand at 2654.227 kb on - strand at 2654.227 kb on - strand at 2654.231 kb on + strand at 2654.231 kb on + strand at 2654.232 kb on - strand at 2654.232 kb on - strand at 2654.253 kb on + strand at 2654.326 kb on + strand, within rraA at 2654.326 kb on + strand, within rraA at 2654.335 kb on + strand, within rraA at 2654.515 kb on + strand, within rraA at 2654.515 kb on + strand, within rraA at 2654.515 kb on + strand, within rraA at 2654.627 kb on + strand, within rraA at 2654.653 kb on - strand, within rraA at 2654.704 kb on - strand at 2654.708 kb on - strand at 2654.749 kb on - strand at 2654.797 kb on - strand at 2654.999 kb on - strand, within OKFHMN_13755 at 2655.003 kb on - strand, within OKFHMN_13755 at 2655.037 kb on - strand, within OKFHMN_13755 at 2655.046 kb on + strand, within OKFHMN_13755 at 2655.065 kb on - strand, within OKFHMN_13755 at 2655.106 kb on - strand, within OKFHMN_13755 at 2655.109 kb on - strand, within OKFHMN_13755 at 2655.148 kb on + strand, within OKFHMN_13755 at 2655.153 kb on + strand, within OKFHMN_13755 at 2655.157 kb on + strand, within OKFHMN_13755 at 2655.347 kb on - strand, within OKFHMN_13755 at 2655.347 kb on - strand, within OKFHMN_13755 at 2655.471 kb on + strand at 2655.478 kb on + strand at 2655.494 kb on + strand at 2655.507 kb on - strand at 2655.547 kb on - strand at 2655.587 kb on + strand at 2655.605 kb on + strand at 2655.605 kb on + strand at 2655.606 kb on - strand at 2655.754 kb on + strand, within OKFHMN_13760 at 2655.754 kb on + strand, within OKFHMN_13760 at 2655.754 kb on + strand, within OKFHMN_13760 at 2655.754 kb on + strand, within OKFHMN_13760 at 2655.756 kb on + strand, within OKFHMN_13760 at 2655.757 kb on - strand, within OKFHMN_13760 at 2655.774 kb on + strand, within OKFHMN_13760 at 2655.840 kb on + strand, within OKFHMN_13760 at 2655.841 kb on - strand, within OKFHMN_13760 at 2655.841 kb on - strand, within OKFHMN_13760 at 2655.855 kb on + strand, within OKFHMN_13760 at 2655.856 kb on - strand, within OKFHMN_13760 at 2655.858 kb on + strand, within OKFHMN_13760 at 2655.924 kb on - strand, within OKFHMN_13760 at 2655.958 kb on + strand, within OKFHMN_13760 at 2655.958 kb on + strand, within OKFHMN_13760 at 2655.958 kb on + strand, within OKFHMN_13760 at 2655.991 kb on - strand, within OKFHMN_13760 at 2656.011 kb on + strand, within OKFHMN_13760 at 2656.012 kb on - strand, within OKFHMN_13760 at 2656.012 kb on - strand, within OKFHMN_13760 at 2656.015 kb on + strand, within OKFHMN_13760 at 2656.069 kb on + strand, within OKFHMN_13760 at 2656.132 kb on - strand at 2656.158 kb on + strand at 2656.158 kb on + strand at 2656.159 kb on - strand at 2656.159 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,653,797 + menA OKFHMN_13745 0.64 +0.1 2,653,798 - menA OKFHMN_13745 0.64 +0.2 2,653,798 - menA OKFHMN_13745 0.64 -0.1 2,654,072 + +0.3 2,654,125 + +0.6 2,654,125 + +0.2 2,654,126 - +0.2 2,654,126 - -1.9 2,654,137 - +0.6 2,654,143 + -0.3 2,654,182 + +0.1 2,654,213 + +1.2 2,654,213 + +0.5 2,654,226 + +0.0 2,654,226 + +0.7 2,654,227 - +0.3 2,654,227 - -1.3 2,654,231 + -0.2 2,654,231 + -1.1 2,654,232 - -0.3 2,654,232 - +0.1 2,654,253 + -0.3 2,654,326 + rraA OKFHMN_13750 0.22 -0.5 2,654,326 + rraA OKFHMN_13750 0.22 +1.4 2,654,335 + rraA OKFHMN_13750 0.24 -0.4 2,654,515 + rraA OKFHMN_13750 0.61 +0.3 2,654,515 + rraA OKFHMN_13750 0.61 +2.3 2,654,515 + rraA OKFHMN_13750 0.61 -1.9 2,654,627 + rraA OKFHMN_13750 0.84 +0.8 2,654,653 - rraA OKFHMN_13750 0.89 -0.1 2,654,704 - -0.2 2,654,708 - -0.2 2,654,749 - -0.5 2,654,797 - +0.6 2,654,999 - OKFHMN_13755 0.35 +0.5 2,655,003 - OKFHMN_13755 0.35 +0.2 2,655,037 - OKFHMN_13755 0.40 +0.5 2,655,046 + OKFHMN_13755 0.42 -0.1 2,655,065 - OKFHMN_13755 0.44 -0.3 2,655,106 - OKFHMN_13755 0.51 +0.3 2,655,109 - OKFHMN_13755 0.51 -0.4 2,655,148 + OKFHMN_13755 0.57 +0.1 2,655,153 + OKFHMN_13755 0.57 -0.1 2,655,157 + OKFHMN_13755 0.58 +0.4 2,655,347 - OKFHMN_13755 0.86 +1.9 2,655,347 - OKFHMN_13755 0.86 +0.3 2,655,471 + -0.7 2,655,478 + +0.1 2,655,494 + +0.2 2,655,507 - +0.3 2,655,547 - +0.2 2,655,587 + +1.2 2,655,605 + +0.3 2,655,605 + +0.0 2,655,606 - -0.9 2,655,754 + OKFHMN_13760 0.31 +1.2 2,655,754 + OKFHMN_13760 0.31 -0.3 2,655,754 + OKFHMN_13760 0.31 -0.3 2,655,754 + OKFHMN_13760 0.31 +0.6 2,655,756 + OKFHMN_13760 0.31 -1.2 2,655,757 - OKFHMN_13760 0.31 +0.1 2,655,774 + OKFHMN_13760 0.34 +1.6 2,655,840 + OKFHMN_13760 0.44 +0.2 2,655,841 - OKFHMN_13760 0.44 -0.5 2,655,841 - OKFHMN_13760 0.44 +0.1 2,655,855 + OKFHMN_13760 0.47 +0.4 2,655,856 - OKFHMN_13760 0.47 +0.3 2,655,858 + OKFHMN_13760 0.47 -0.3 2,655,924 - OKFHMN_13760 0.58 -0.5 2,655,958 + OKFHMN_13760 0.63 -0.2 2,655,958 + OKFHMN_13760 0.63 -0.1 2,655,958 + OKFHMN_13760 0.63 -0.9 2,655,991 - OKFHMN_13760 0.68 +0.6 2,656,011 + OKFHMN_13760 0.72 +0.4 2,656,012 - OKFHMN_13760 0.72 -1.5 2,656,012 - OKFHMN_13760 0.72 +0.6 2,656,015 + OKFHMN_13760 0.72 -0.3 2,656,069 + OKFHMN_13760 0.81 -0.1 2,656,132 - +0.1 2,656,158 + +0.5 2,656,158 + +1.2 2,656,159 - -0.3 2,656,159 - +0.2
Or see this region's nucleotide sequence