Strain Fitness in Escherichia coli ECRC100 around OKFHMN_13420

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntrpoC and rpoB_R687H are separated by 76 nucleotidesrpoB_R687H and rplL are separated by 319 nucleotidesrplL and rplJ are separated by 66 nucleotides OKFHMN_13415: rpoC - DNA-directed RNA polymerase subunit beta', at 2,576,573 to 2,580,796 rpoC OKFHMN_13420: rpoB_R687H - DNA-directed RNA polymerase subunit beta RpoB, at 2,580,873 to 2,584,901 _R687H OKFHMN_13430: rplL - 50S ribosomal protein L7/L12, at 2,585,221 to 2,585,586 rplL OKFHMN_13435: rplJ - 50S ribosomal protein L10, at 2,585,653 to 2,586,150 rplJ Position (kb) 2580 2581 2582 2583 2584 2585Strain fitness (log2 ratio) -1 0 1at 2585.144 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,585,144 - -0.7

Or see this region's nucleotide sequence